Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Gm6576-201ENSMUST00000169678 883 ntBASIC13.76□□□□□ -0.21
Nkx2-1P50220 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.75□□□□□ -0.21
Nkx2-1P50220 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.75□□□□□ -0.21
Nkx2-1P50220 Mtag2-201ENSMUST00000058665 714 ntBASIC13.75□□□□□ -0.21
Nkx2-1P50220 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Nkx2-1P50220 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.74□□□□□ -0.21
Nkx2-1P50220 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.74□□□□□ -0.21
Nkx2-1P50220 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-1P50220 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-1P50220 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms