Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LmnaP48678 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LmnaP48678 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LmnaP48678 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.12■□□□□ 0.33
LmnaP48678 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LmnaP48678 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
LmnaP48678 Gm27459-201ENSMUST00000184860 107 ntBASIC17.12■□□□□ 0.33
LmnaP48678 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
LmnaP48678 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LmnaP48678 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LmnaP48678 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LmnaP48678 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LmnaP48678 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LmnaP48678 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.12■□□□□ 0.33
LmnaP48678 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LmnaP48678 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LmnaP48678 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LmnaP48678 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LmnaP48678 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LmnaP48678 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LmnaP48678 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LmnaP48678 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LmnaP48678 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LmnaP48678 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LmnaP48678 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LmnaP48678 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.11■□□□□ 0.33
LmnaP48678 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LmnaP48678 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.11■□□□□ 0.33
LmnaP48678 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LmnaP48678 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.11■□□□□ 0.33
LmnaP48678 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LmnaP48678 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.11■□□□□ 0.33
LmnaP48678 Gm45328-201ENSMUST00000210942 917 ntBASIC17.11■□□□□ 0.33
LmnaP48678 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LmnaP48678 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LmnaP48678 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LmnaP48678 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LmnaP48678 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LmnaP48678 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LmnaP48678 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LmnaP48678 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LmnaP48678 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LmnaP48678 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LmnaP48678 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LmnaP48678 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LmnaP48678 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LmnaP48678 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LmnaP48678 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LmnaP48678 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LmnaP48678 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
LmnaP48678 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LmnaP48678 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LmnaP48678 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.1■□□□□ 0.33
LmnaP48678 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LmnaP48678 Gm18206-201ENSMUST00000207027 926 ntBASIC17.1■□□□□ 0.33
LmnaP48678 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LmnaP48678 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
LmnaP48678 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LmnaP48678 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LmnaP48678 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LmnaP48678 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LmnaP48678 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LmnaP48678 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.09■□□□□ 0.33
LmnaP48678 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.09■□□□□ 0.33
LmnaP48678 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LmnaP48678 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LmnaP48678 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LmnaP48678 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.09■□□□□ 0.33
LmnaP48678 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LmnaP48678 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LmnaP48678 Gm43347-201ENSMUST00000200226 580 ntBASIC17.09■□□□□ 0.33
LmnaP48678 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LmnaP48678 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LmnaP48678 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LmnaP48678 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LmnaP48678 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LmnaP48678 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.09■□□□□ 0.33
LmnaP48678 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LmnaP48678 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LmnaP48678 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LmnaP48678 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LmnaP48678 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LmnaP48678 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.08■□□□□ 0.33
LmnaP48678 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LmnaP48678 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LmnaP48678 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LmnaP48678 Gm24841-201ENSMUST00000158676 357 ntBASIC17.08■□□□□ 0.32
LmnaP48678 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.08■□□□□ 0.32
LmnaP48678 Gm18195-201ENSMUST00000207604 706 ntBASIC17.08■□□□□ 0.32
LmnaP48678 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LmnaP48678 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LmnaP48678 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LmnaP48678 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LmnaP48678 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LmnaP48678 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.08■□□□□ 0.32
LmnaP48678 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LmnaP48678 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LmnaP48678 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LmnaP48678 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LmnaP48678 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms