Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sox18P43680 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sox18P43680 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox18P43680 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Sox18P43680 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.83■□□□□ 0.12
Sox18P43680 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sox18P43680 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.83■□□□□ 0.12
Sox18P43680 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Sox18P43680 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sox18P43680 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox18P43680 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox18P43680 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sox18P43680 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox18P43680 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sox18P43680 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sox18P43680 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sox18P43680 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox18P43680 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sox18P43680 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.82■□□□□ 0.12
Sox18P43680 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox18P43680 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox18P43680 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sox18P43680 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.82■□□□□ 0.12
Sox18P43680 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox18P43680 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox18P43680 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sox18P43680 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sox18P43680 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Sox18P43680 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.82■□□□□ 0.12
Sox18P43680 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sox18P43680 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.82■□□□□ 0.12
Sox18P43680 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Sox18P43680 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox18P43680 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox18P43680 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Sox18P43680 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox18P43680 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Sox18P43680 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox18P43680 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.82■□□□□ 0.12
Sox18P43680 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox18P43680 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox18P43680 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox18P43680 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox18P43680 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Sox18P43680 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox18P43680 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sox18P43680 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox18P43680 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sox18P43680 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.81■□□□□ 0.12
Sox18P43680 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Sox18P43680 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.81■□□□□ 0.12
Sox18P43680 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.81■□□□□ 0.12
Sox18P43680 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.81■□□□□ 0.12
Sox18P43680 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sox18P43680 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox18P43680 Gm26308-201ENSMUST00000157768 69 ntBASIC15.81■□□□□ 0.12
Sox18P43680 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox18P43680 Gm7230-201ENSMUST00000173026 815 ntBASIC15.81■□□□□ 0.12
Sox18P43680 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.81■□□□□ 0.12
Sox18P43680 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox18P43680 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox18P43680 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox18P43680 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Sox18P43680 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Sox18P43680 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox18P43680 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox18P43680 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox18P43680 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox18P43680 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox18P43680 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox18P43680 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox18P43680 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Sox18P43680 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox18P43680 Gm15920-201ENSMUST00000118998 402 ntBASIC15.8■□□□□ 0.12
Sox18P43680 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.8■□□□□ 0.12
Sox18P43680 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.8■□□□□ 0.12
Sox18P43680 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sox18P43680 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.8■□□□□ 0.12
Sox18P43680 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.8■□□□□ 0.12
Sox18P43680 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox18P43680 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox18P43680 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sox18P43680 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox18P43680 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox18P43680 Phf7-203ENSMUST00000226565 1971 ntBASIC15.8■□□□□ 0.12
Sox18P43680 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.8■□□□□ 0.12
Sox18P43680 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.79■□□□□ 0.12
Sox18P43680 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox18P43680 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.79■□□□□ 0.12
Sox18P43680 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox18P43680 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox18P43680 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox18P43680 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox18P43680 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sox18P43680 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox18P43680 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox18P43680 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.79■□□□□ 0.12
Sox18P43680 Gm14140-201ENSMUST00000119999 995 ntBASIC15.79■□□□□ 0.12
Sox18P43680 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.79■□□□□ 0.12
Sox18P43680 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms