Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox6P40645 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.56■□□□□ 0.08
Sox6P40645 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox6P40645 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox6P40645 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox6P40645 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox6P40645 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox6P40645 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox6P40645 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sox6P40645 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.55■□□□□ 0.08
Sox6P40645 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Sox6P40645 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Sox6P40645 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sox6P40645 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Sox6P40645 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.55■□□□□ 0.08
Sox6P40645 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sox6P40645 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Sox6P40645 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sox6P40645 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sox6P40645 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox6P40645 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.55■□□□□ 0.08
Sox6P40645 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.54■□□□□ 0.08
Sox6P40645 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.54■□□□□ 0.08
Sox6P40645 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.54■□□□□ 0.08
Sox6P40645 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.54■□□□□ 0.08
Sox6P40645 Timm23-208ENSMUST00000226683 750 ntBASIC15.54■□□□□ 0.08
Sox6P40645 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.54■□□□□ 0.08
Sox6P40645 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sox6P40645 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sox6P40645 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Sox6P40645 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.54■□□□□ 0.08
Sox6P40645 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.54■□□□□ 0.08
Sox6P40645 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.54■□□□□ 0.08
Sox6P40645 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox6P40645 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox6P40645 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox6P40645 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox6P40645 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox6P40645 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.53■□□□□ 0.08
Sox6P40645 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.53■□□□□ 0.08
Sox6P40645 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox6P40645 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Sox6P40645 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.53■□□□□ 0.08
Sox6P40645 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox6P40645 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox6P40645 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox6P40645 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.53■□□□□ 0.08
Sox6P40645 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox6P40645 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox6P40645 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Sox6P40645 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sox6P40645 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox6P40645 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox6P40645 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox6P40645 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox6P40645 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox6P40645 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox6P40645 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms