Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LdlrP35951 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LdlrP35951 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LdlrP35951 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LdlrP35951 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LdlrP35951 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LdlrP35951 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.48■□□□□ 0.23
LdlrP35951 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LdlrP35951 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LdlrP35951 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
LdlrP35951 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LdlrP35951 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LdlrP35951 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LdlrP35951 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LdlrP35951 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LdlrP35951 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LdlrP35951 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LdlrP35951 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.47■□□□□ 0.23
LdlrP35951 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LdlrP35951 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.47■□□□□ 0.23
LdlrP35951 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LdlrP35951 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LdlrP35951 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LdlrP35951 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
LdlrP35951 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.47■□□□□ 0.23
LdlrP35951 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LdlrP35951 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LdlrP35951 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LdlrP35951 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LdlrP35951 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.47■□□□□ 0.23
LdlrP35951 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LdlrP35951 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LdlrP35951 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LdlrP35951 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LdlrP35951 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LdlrP35951 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LdlrP35951 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LdlrP35951 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LdlrP35951 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.47■□□□□ 0.23
LdlrP35951 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LdlrP35951 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LdlrP35951 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LdlrP35951 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LdlrP35951 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LdlrP35951 Gm7889-201ENSMUST00000185591 958 ntBASIC16.46■□□□□ 0.23
LdlrP35951 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.46■□□□□ 0.23
LdlrP35951 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LdlrP35951 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LdlrP35951 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
LdlrP35951 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LdlrP35951 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.46■□□□□ 0.23
LdlrP35951 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LdlrP35951 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LdlrP35951 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LdlrP35951 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LdlrP35951 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LdlrP35951 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LdlrP35951 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
LdlrP35951 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LdlrP35951 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LdlrP35951 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LdlrP35951 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LdlrP35951 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LdlrP35951 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LdlrP35951 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
LdlrP35951 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LdlrP35951 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LdlrP35951 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.45■□□□□ 0.22
LdlrP35951 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.45■□□□□ 0.22
LdlrP35951 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LdlrP35951 Gm3375-201ENSMUST00000203929 796 ntBASIC16.45■□□□□ 0.22
LdlrP35951 Timm23-208ENSMUST00000226683 750 ntBASIC16.45■□□□□ 0.22
LdlrP35951 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LdlrP35951 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LdlrP35951 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
LdlrP35951 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LdlrP35951 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LdlrP35951 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LdlrP35951 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LdlrP35951 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LdlrP35951 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LdlrP35951 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LdlrP35951 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LdlrP35951 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LdlrP35951 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LdlrP35951 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.44■□□□□ 0.22
LdlrP35951 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LdlrP35951 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LdlrP35951 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LdlrP35951 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LdlrP35951 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LdlrP35951 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LdlrP35951 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.44■□□□□ 0.22
LdlrP35951 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LdlrP35951 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LdlrP35951 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LdlrP35951 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LdlrP35951 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LdlrP35951 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LdlrP35951 Gm7367-201ENSMUST00000057611 492 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms