Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc1P35601 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc1P35601 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc1P35601 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc1P35601 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rfc1P35601 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc1P35601 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc1P35601 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rfc1P35601 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc1P35601 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc1P35601 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc1P35601 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rfc1P35601 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Rfc1P35601 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfc1P35601 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.47■□□□□ 0.39
Rfc1P35601 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc1P35601 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc1P35601 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.47■□□□□ 0.39
Rfc1P35601 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc1P35601 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc1P35601 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.47■□□□□ 0.39
Rfc1P35601 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.47■□□□□ 0.39
Rfc1P35601 Gm5408-201ENSMUST00000197998 747 ntBASIC17.47■□□□□ 0.39
Rfc1P35601 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rfc1P35601 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc1P35601 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc1P35601 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rfc1P35601 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc1P35601 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc1P35601 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc1P35601 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc1P35601 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc1P35601 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc1P35601 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc1P35601 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfc1P35601 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rfc1P35601 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rfc1P35601 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.47■□□□□ 0.39
Rfc1P35601 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc1P35601 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Rfc1P35601 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc1P35601 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc1P35601 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc1P35601 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc1P35601 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Rfc1P35601 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rfc1P35601 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc1P35601 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc1P35601 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rfc1P35601 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc1P35601 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc1P35601 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc1P35601 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc1P35601 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc1P35601 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc1P35601 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc1P35601 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Rfc1P35601 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Rfc1P35601 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc1P35601 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc1P35601 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfc1P35601 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rfc1P35601 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc1P35601 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Rfc1P35601 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rfc1P35601 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc1P35601 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc1P35601 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc1P35601 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Rfc1P35601 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc1P35601 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rfc1P35601 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc1P35601 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc1P35601 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc1P35601 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rfc1P35601 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc1P35601 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc1P35601 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc1P35601 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc1P35601 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc1P35601 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc1P35601 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfc1P35601 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfc1P35601 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.44■□□□□ 0.38
Rfc1P35601 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfc1P35601 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Rfc1P35601 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfc1P35601 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfc1P35601 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.44■□□□□ 0.38
Rfc1P35601 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rfc1P35601 Gm13401-201ENSMUST00000117074 291 ntBASIC17.44■□□□□ 0.38
Rfc1P35601 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.44■□□□□ 0.38
Rfc1P35601 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.44■□□□□ 0.38
Rfc1P35601 Mir2861-201ENSMUST00000175539 82 ntBASIC17.44■□□□□ 0.38
Rfc1P35601 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.44■□□□□ 0.38
Rfc1P35601 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfc1P35601 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.44■□□□□ 0.38
Rfc1P35601 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfc1P35601 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfc1P35601 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms