Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm43799-201ENSMUST00000201845 579 ntBASIC16.96■□□□□ 0.31
Mmp13P33435 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp13P33435 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp13P33435 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp13P33435 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp13P33435 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp13P33435 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mmp13P33435 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Mmp13P33435 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mmp13P33435 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.96■□□□□ 0.3
Mmp13P33435 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp13P33435 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Mmp13P33435 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Mmp13P33435 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp13P33435 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Mmp13P33435 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp13P33435 Gm17661-201ENSMUST00000170317 270 ntBASIC16.95■□□□□ 0.3
Mmp13P33435 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Mmp13P33435 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.95■□□□□ 0.3
Mmp13P33435 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp13P33435 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp13P33435 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Mmp13P33435 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp13P33435 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp13P33435 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Mmp13P33435 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp13P33435 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Mmp13P33435 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.94■□□□□ 0.3
Mmp13P33435 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Mmp13P33435 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Gm27463-201ENSMUST00000183569 57 ntBASIC16.94■□□□□ 0.3
Mmp13P33435 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.94■□□□□ 0.3
Mmp13P33435 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.94■□□□□ 0.3
Mmp13P33435 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Mmp13P33435 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.93■□□□□ 0.3
Mmp13P33435 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Gm13836-201ENSMUST00000121159 501 ntBASIC16.93■□□□□ 0.3
Mmp13P33435 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Mmp13P33435 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.93■□□□□ 0.3
Mmp13P33435 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.93■□□□□ 0.3
Mmp13P33435 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Mmp13P33435 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.92■□□□□ 0.3
Mmp13P33435 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Mmp13P33435 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Mmp13P33435 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.92■□□□□ 0.3
Mmp13P33435 Gm37025-201ENSMUST00000195159 829 ntBASIC16.92■□□□□ 0.3
Mmp13P33435 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.92■□□□□ 0.3
Mmp13P33435 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.92■□□□□ 0.3
Mmp13P33435 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Mmp13P33435 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms