Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm43799-201ENSMUST00000201845 579 ntBASIC16.96■□□□□ 0.31
Mmp13P33435 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp13P33435 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp13P33435 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp13P33435 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp13P33435 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp13P33435 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mmp13P33435 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Mmp13P33435 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mmp13P33435 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.96■□□□□ 0.3
Mmp13P33435 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp13P33435 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Mmp13P33435 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Mmp13P33435 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp13P33435 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Mmp13P33435 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp13P33435 Gm17661-201ENSMUST00000170317 270 ntBASIC16.95■□□□□ 0.3
Mmp13P33435 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Mmp13P33435 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.95■□□□□ 0.3
Mmp13P33435 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp13P33435 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp13P33435 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Mmp13P33435 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp13P33435 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp13P33435 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Mmp13P33435 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp13P33435 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Mmp13P33435 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.94■□□□□ 0.3
Mmp13P33435 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Mmp13P33435 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Gm27463-201ENSMUST00000183569 57 ntBASIC16.94■□□□□ 0.3
Mmp13P33435 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.94■□□□□ 0.3
Mmp13P33435 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.94■□□□□ 0.3
Mmp13P33435 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Mmp13P33435 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp13P33435 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.93■□□□□ 0.3
Mmp13P33435 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Gm13836-201ENSMUST00000121159 501 ntBASIC16.93■□□□□ 0.3
Mmp13P33435 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Mmp13P33435 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.93■□□□□ 0.3
Mmp13P33435 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.93■□□□□ 0.3
Mmp13P33435 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Mmp13P33435 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp13P33435 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.92■□□□□ 0.3
Mmp13P33435 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Mmp13P33435 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Mmp13P33435 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.92■□□□□ 0.3
Mmp13P33435 Gm37025-201ENSMUST00000195159 829 ntBASIC16.92■□□□□ 0.3
Mmp13P33435 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.92■□□□□ 0.3
Mmp13P33435 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.92■□□□□ 0.3
Mmp13P33435 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Mmp13P33435 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms