Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccl6P27784 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.91□□□□□ -0.34
Ccl6P27784 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.91□□□□□ -0.34
Ccl6P27784 Gm11539-201ENSMUST00000119837 557 ntBASIC12.91□□□□□ -0.34
Ccl6P27784 Gm13436-201ENSMUST00000120418 567 ntBASIC12.91□□□□□ -0.34
Ccl6P27784 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ccl6P27784 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.91□□□□□ -0.34
Ccl6P27784 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ccl6P27784 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl6P27784 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl6P27784 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl6P27784 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.9□□□□□ -0.34
Ccl6P27784 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccl6P27784 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.9□□□□□ -0.34
Ccl6P27784 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccl6P27784 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccl6P27784 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl6P27784 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl6P27784 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl6P27784 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl6P27784 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl6P27784 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl6P27784 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.9□□□□□ -0.34
Ccl6P27784 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl6P27784 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccl6P27784 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl6P27784 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl6P27784 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl6P27784 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl6P27784 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl6P27784 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl6P27784 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccl6P27784 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl6P27784 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ccl6P27784 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Ccl6P27784 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Ccl6P27784 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ccl6P27784 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ccl6P27784 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccl6P27784 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.89□□□□□ -0.35
Ccl6P27784 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccl6P27784 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ccl6P27784 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Gm15565-201ENSMUST00000118890 427 ntBASIC12.89□□□□□ -0.35
Ccl6P27784 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.89□□□□□ -0.35
Ccl6P27784 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ccl6P27784 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.89□□□□□ -0.35
Ccl6P27784 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Ccl6P27784 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccl6P27784 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ccl6P27784 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl6P27784 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ccl6P27784 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccl6P27784 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl6P27784 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms