Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.21□□□□□ -0.13
H3f3cP02301 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3cP02301 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3cP02301 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3cP02301 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3f3cP02301 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
H3f3cP02301 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
H3f3cP02301 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
H3f3cP02301 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
H3f3cP02301 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
H3f3cP02301 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
H3f3cP02301 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
H3f3cP02301 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
H3f3cP02301 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
H3f3cP02301 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.2□□□□□ -0.14
H3f3cP02301 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
H3f3cP02301 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.2□□□□□ -0.14
H3f3cP02301 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
H3f3cP02301 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
H3f3cP02301 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
H3f3cP02301 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.2□□□□□ -0.14
H3f3cP02301 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
H3f3cP02301 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
H3f3cP02301 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3f3cP02301 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
H3f3cP02301 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
H3f3cP02301 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H3f3cP02301 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3cP02301 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3cP02301 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3cP02301 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3cP02301 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3cP02301 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.18□□□□□ -0.14
H3f3cP02301 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.18□□□□□ -0.14
H3f3cP02301 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3cP02301 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
H3f3cP02301 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
H3f3cP02301 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3cP02301 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3cP02301 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
H3f3cP02301 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3cP02301 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.18□□□□□ -0.14
H3f3cP02301 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
H3f3cP02301 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.18□□□□□ -0.14
H3f3cP02301 Gm13836-201ENSMUST00000121159 501 ntBASIC14.18□□□□□ -0.14
H3f3cP02301 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.18□□□□□ -0.14
H3f3cP02301 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3cP02301 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3cP02301 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3cP02301 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3cP02301 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3cP02301 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3cP02301 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3f3cP02301 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
H3f3cP02301 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.18□□□□□ -0.14
H3f3cP02301 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
H3f3cP02301 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
H3f3cP02301 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3f3cP02301 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.17□□□□□ -0.14
H3f3cP02301 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H3f3cP02301 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms