Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
P01852 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
P01852 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.12■□□□□ 0.01
P01852 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
P01852 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
P01852 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.12■□□□□ 0.01
P01852 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
P01852 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
P01852 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.11■□□□□ 0.01
P01852 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
P01852 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Gm5587-201ENSMUST00000206270 674 ntBASIC15.11■□□□□ 0.01
P01852 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.11■□□□□ 0.01
P01852 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.11■□□□□ 0.01
P01852 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.11■□□□□ 0.01
P01852 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.11■□□□□ 0.01
P01852 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
P01852 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P01852 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.1■□□□□ 0.01
P01852 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P01852 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
P01852 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
P01852 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P01852 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.1■□□□□ 0.01
P01852 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
P01852 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
P01852 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P01852 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P01852 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
P01852 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P01852 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P01852 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P01852 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.1■□□□□ 0.01
P01852 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.1■□□□□ 0.01
P01852 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
P01852 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P01852 Gm18115-201ENSMUST00000221209 621 ntBASIC15.1■□□□□ 0.01
P01852 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P01852 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P01852 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P01852 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P01852 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
P01852 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P01852 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
P01852 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
P01852 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
P01852 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
P01852 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
P01852 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
P01852 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
P01852 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.09■□□□□ 0.01
P01852 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P01852 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P01852 Gm13216-201ENSMUST00000117145 591 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms