Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ifna1P01572 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ifna1P01572 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14□□□□□ -0.17
Ifna1P01572 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14□□□□□ -0.17
Ifna1P01572 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ifna1P01572 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ifna1P01572 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ifna1P01572 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ifna1P01572 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ifna1P01572 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ifna1P01572 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ifna1P01572 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ifna1P01572 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ifna1P01572 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.99□□□□□ -0.17
Ifna1P01572 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.99□□□□□ -0.17
Ifna1P01572 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.99□□□□□ -0.17
Ifna1P01572 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.99□□□□□ -0.17
Ifna1P01572 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.99□□□□□ -0.17
Ifna1P01572 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.99□□□□□ -0.17
Ifna1P01572 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ifna1P01572 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Ifna1P01572 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
Ifna1P01572 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.99□□□□□ -0.17
Ifna1P01572 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ifna1P01572 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ifna1P01572 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Ifna1P01572 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Ifna1P01572 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Gm12933-201ENSMUST00000120203 872 ntBASIC13.98□□□□□ -0.17
Ifna1P01572 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.98□□□□□ -0.17
Ifna1P01572 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ifna1P01572 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Ifna1P01572 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ifna1P01572 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ifna1P01572 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Ifna1P01572 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ifna1P01572 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ifna1P01572 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
Ifna1P01572 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ifna1P01572 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ifna1P01572 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ifna1P01572 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ifna1P01572 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ifna1P01572 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Ifna1P01572 Gm37292-201ENSMUST00000192062 758 ntBASIC13.97□□□□□ -0.17
Ifna1P01572 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ifna1P01572 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ifna1P01572 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ifna1P01572 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Ifna1P01572 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ifna1P01572 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ifna1P01572 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ifna1P01572 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ifna1P01572 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ifna1P01572 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ifna1P01572 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ifna1P01572 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ifna1P01572 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ifna1P01572 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.96□□□□□ -0.17
Ifna1P01572 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Ifna1P01572 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ifna1P01572 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ifna1P01572 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms