Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh2d1aO88890 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sh2d1aO88890 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.72□□□□□ -0.53
Sh2d1aO88890 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.72□□□□□ -0.53
Sh2d1aO88890 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sh2d1aO88890 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Gm42918-201ENSMUST00000199249 1580 ntBASIC11.71□□□□□ -0.53
Sh2d1aO88890 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh2d1aO88890 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh2d1aO88890 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.71□□□□□ -0.53
Sh2d1aO88890 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.71□□□□□ -0.53
Sh2d1aO88890 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sh2d1aO88890 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sh2d1aO88890 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.71□□□□□ -0.53
Sh2d1aO88890 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sh2d1aO88890 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Sh2d1aO88890 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sh2d1aO88890 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sh2d1aO88890 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sh2d1aO88890 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sh2d1aO88890 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sh2d1aO88890 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sh2d1aO88890 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sh2d1aO88890 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sh2d1aO88890 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh2d1aO88890 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC11.7□□□□□ -0.54
Sh2d1aO88890 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.7□□□□□ -0.54
Sh2d1aO88890 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Gm18958-201ENSMUST00000174258 762 ntBASIC11.7□□□□□ -0.54
Sh2d1aO88890 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Sh2d1aO88890 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms