Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Capns1O88456 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.33■□□□□ 0.04
Capns1O88456 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Capns1O88456 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Capns1O88456 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Capns1O88456 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Capns1O88456 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Capns1O88456 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Capns1O88456 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Capns1O88456 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.32■□□□□ 0.04
Capns1O88456 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.32■□□□□ 0.04
Capns1O88456 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Capns1O88456 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capns1O88456 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Capns1O88456 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Capns1O88456 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 Mir5122-201ENSMUST00000175004 89 ntBASIC15.31■□□□□ 0.04
Capns1O88456 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.31■□□□□ 0.04
Capns1O88456 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.31■□□□□ 0.04
Capns1O88456 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Capns1O88456 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.3■□□□□ 0.04
Capns1O88456 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Capns1O88456 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.3■□□□□ 0.04
Capns1O88456 Gm13158-201ENSMUST00000122007 736 ntBASIC15.3■□□□□ 0.04
Capns1O88456 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Capns1O88456 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.3■□□□□ 0.04
Capns1O88456 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Capns1O88456 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.3■□□□□ 0.04
Capns1O88456 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Capns1O88456 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Capns1O88456 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Capns1O88456 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capns1O88456 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capns1O88456 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capns1O88456 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capns1O88456 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Capns1O88456 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capns1O88456 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capns1O88456 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capns1O88456 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.29■□□□□ 0.04
Capns1O88456 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.29■□□□□ 0.04
Capns1O88456 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Capns1O88456 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms