Protein–RNA interactions for Protein: O55241

Hcrt, Orexin, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HcrtO55241 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HcrtO55241 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HcrtO55241 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.54■□□□□ 0.24
HcrtO55241 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
HcrtO55241 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.53■□□□□ 0.24
HcrtO55241 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
HcrtO55241 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.53■□□□□ 0.24
HcrtO55241 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
HcrtO55241 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HcrtO55241 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
HcrtO55241 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HcrtO55241 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
HcrtO55241 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
HcrtO55241 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HcrtO55241 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HcrtO55241 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HcrtO55241 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HcrtO55241 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HcrtO55241 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.52■□□□□ 0.24
HcrtO55241 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.52■□□□□ 0.24
HcrtO55241 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.52■□□□□ 0.24
HcrtO55241 Gm10231-201ENSMUST00000181584 441 ntBASIC16.52■□□□□ 0.24
HcrtO55241 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HcrtO55241 Gm10175-202ENSMUST00000208752 441 ntBASIC16.52■□□□□ 0.24
HcrtO55241 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HcrtO55241 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HcrtO55241 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HcrtO55241 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HcrtO55241 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HcrtO55241 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HcrtO55241 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HcrtO55241 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.52■□□□□ 0.23
HcrtO55241 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HcrtO55241 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HcrtO55241 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HcrtO55241 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HcrtO55241 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HcrtO55241 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HcrtO55241 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HcrtO55241 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HcrtO55241 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HcrtO55241 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HcrtO55241 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HcrtO55241 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HcrtO55241 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HcrtO55241 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HcrtO55241 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.51■□□□□ 0.23
HcrtO55241 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HcrtO55241 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HcrtO55241 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.51■□□□□ 0.23
HcrtO55241 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HcrtO55241 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HcrtO55241 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HcrtO55241 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HcrtO55241 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HcrtO55241 Gm11336-201ENSMUST00000118168 334 ntBASIC16.51■□□□□ 0.23
HcrtO55241 Gm18115-201ENSMUST00000221209 621 ntBASIC16.51■□□□□ 0.23
HcrtO55241 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HcrtO55241 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HcrtO55241 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HcrtO55241 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HcrtO55241 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HcrtO55241 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HcrtO55241 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
HcrtO55241 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HcrtO55241 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HcrtO55241 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HcrtO55241 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HcrtO55241 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.5■□□□□ 0.23
HcrtO55241 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HcrtO55241 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
HcrtO55241 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HcrtO55241 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HcrtO55241 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HcrtO55241 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms