Protein–RNA interactions for Protein: O55229

Chkb, Choline/ethanolamine kinase, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkbO55229 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChkbO55229 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ChkbO55229 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChkbO55229 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ChkbO55229 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChkbO55229 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChkbO55229 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChkbO55229 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ChkbO55229 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ChkbO55229 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ChkbO55229 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ChkbO55229 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChkbO55229 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ChkbO55229 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChkbO55229 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ChkbO55229 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ChkbO55229 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChkbO55229 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ChkbO55229 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ChkbO55229 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChkbO55229 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ChkbO55229 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ChkbO55229 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ChkbO55229 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChkbO55229 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ChkbO55229 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChkbO55229 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ChkbO55229 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChkbO55229 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkbO55229 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkbO55229 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkbO55229 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkbO55229 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.66■□□□□ 0.42
ChkbO55229 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkbO55229 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ChkbO55229 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.66■□□□□ 0.42
ChkbO55229 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.66■□□□□ 0.42
ChkbO55229 Gm11643-201ENSMUST00000119578 864 ntBASIC17.66■□□□□ 0.42
ChkbO55229 Mir6982-201ENSMUST00000184354 68 ntBASIC17.66■□□□□ 0.42
ChkbO55229 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.66■□□□□ 0.42
ChkbO55229 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ChkbO55229 Gm18025-201ENSMUST00000221733 862 ntBASIC17.66■□□□□ 0.42
ChkbO55229 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ChkbO55229 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkbO55229 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ChkbO55229 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkbO55229 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ChkbO55229 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkbO55229 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkbO55229 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ChkbO55229 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkbO55229 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkbO55229 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
ChkbO55229 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkbO55229 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ChkbO55229 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkbO55229 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkbO55229 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
ChkbO55229 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.65■□□□□ 0.42
ChkbO55229 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkbO55229 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkbO55229 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkbO55229 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkbO55229 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ChkbO55229 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkbO55229 Mir1199-201ENSMUST00000117015 119 ntBASIC17.65■□□□□ 0.42
ChkbO55229 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.65■□□□□ 0.42
ChkbO55229 Mir6349-201ENSMUST00000184059 97 ntBASIC17.65■□□□□ 0.42
ChkbO55229 Gm43183-201ENSMUST00000200632 547 ntBASIC17.65■□□□□ 0.42
ChkbO55229 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.65■□□□□ 0.42
ChkbO55229 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkbO55229 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ChkbO55229 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkbO55229 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkbO55229 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkbO55229 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkbO55229 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChkbO55229 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
ChkbO55229 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
ChkbO55229 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
ChkbO55229 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkbO55229 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkbO55229 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkbO55229 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.64■□□□□ 0.41
ChkbO55229 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
ChkbO55229 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ChkbO55229 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkbO55229 Gm12382-201ENSMUST00000122005 922 ntBASIC17.64■□□□□ 0.41
ChkbO55229 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ChkbO55229 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.64■□□□□ 0.41
ChkbO55229 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ChkbO55229 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkbO55229 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkbO55229 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ChkbO55229 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ChkbO55229 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ChkbO55229 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkbO55229 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkbO55229 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChkbO55229 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms