Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.11□□□□□ -0.31
Pde6dO55057 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pde6dO55057 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pde6dO55057 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.11□□□□□ -0.31
Pde6dO55057 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Pde6dO55057 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pde6dO55057 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6dO55057 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6dO55057 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6dO55057 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6dO55057 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pde6dO55057 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pde6dO55057 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6dO55057 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6dO55057 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pde6dO55057 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pde6dO55057 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6dO55057 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6dO55057 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6dO55057 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6dO55057 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6dO55057 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6dO55057 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6dO55057 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6dO55057 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pde6dO55057 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6dO55057 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6dO55057 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6dO55057 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pde6dO55057 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6dO55057 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pde6dO55057 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6dO55057 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6dO55057 Gm2399-201ENSMUST00000104944 225 ntBASIC13.09□□□□□ -0.31
Pde6dO55057 Nespas-201ENSMUST00000143738 1083 ntBASIC13.09□□□□□ -0.31
Pde6dO55057 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.09□□□□□ -0.31
Pde6dO55057 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6dO55057 Gm6420-201ENSMUST00000193885 723 ntBASIC13.09□□□□□ -0.31
Pde6dO55057 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6dO55057 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6dO55057 Gm6139-201ENSMUST00000079261 882 ntBASIC13.09□□□□□ -0.31
Pde6dO55057 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6dO55057 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pde6dO55057 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pde6dO55057 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6dO55057 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6dO55057 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.09□□□□□ -0.31
Pde6dO55057 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6dO55057 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6dO55057 Asic1-205ENSMUST00000228185 1818 ntBASIC13.09□□□□□ -0.31
Pde6dO55057 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pde6dO55057 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.08□□□□□ -0.31
Pde6dO55057 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pde6dO55057 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6dO55057 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6dO55057 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.08□□□□□ -0.32
Pde6dO55057 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.08□□□□□ -0.32
Pde6dO55057 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6dO55057 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6dO55057 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6dO55057 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pde6dO55057 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6dO55057 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6dO55057 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6dO55057 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6dO55057 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pde6dO55057 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pde6dO55057 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6dO55057 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6dO55057 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6dO55057 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6dO55057 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6dO55057 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.07□□□□□ -0.32
Pde6dO55057 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6dO55057 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6dO55057 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6dO55057 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6dO55057 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pde6dO55057 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pde6dO55057 Gm13241-201ENSMUST00000094493 780 ntBASIC13.07□□□□□ -0.32
Pde6dO55057 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pde6dO55057 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms