Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trav13d-3J3QMG8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Gm18421-201ENSMUST00000204122 625 ntBASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13d-3J3QMG8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13d-3J3QMG8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Gm22697-201ENSMUST00000175194 63 ntBASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Gm27389-201ENSMUST00000183622 195 ntBASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Gm21559-201ENSMUST00000220638 855 ntBASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Gm8587-201ENSMUST00000076538 843 ntBASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13d-3J3QMG8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13d-3J3QMG8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms