Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
9930021J03RikH3BKP8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.45■□□□□ 0.06
9930021J03RikH3BKP8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
9930021J03RikH3BKP8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
9930021J03RikH3BKP8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Gm11950-201ENSMUST00000121615 838 ntBASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
9930021J03RikH3BKP8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.42■□□□□ 0.06
9930021J03RikH3BKP8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
9930021J03RikH3BKP8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
9930021J03RikH3BKP8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
9930021J03RikH3BKP8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
9930021J03RikH3BKP8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
9930021J03RikH3BKP8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.42■□□□□ 0.06
9930021J03RikH3BKP8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
9930021J03RikH3BKP8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
9930021J03RikH3BKP8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
9930021J03RikH3BKP8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
9930021J03RikH3BKP8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
9930021J03RikH3BKP8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
9930021J03RikH3BKP8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
9930021J03RikH3BKP8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
9930021J03RikH3BKP8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Gm9103-201ENSMUST00000119371 405 ntBASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Gm10052-201ENSMUST00000168019 960 ntBASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Gm7729-201ENSMUST00000050143 801 ntBASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
9930021J03RikH3BKP8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms