Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc28a1E9PXX9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc28a1E9PXX9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Slc28a1E9PXX9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc28a1E9PXX9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc28a1E9PXX9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc28a1E9PXX9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc28a1E9PXX9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Slc28a1E9PXX9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc28a1E9PXX9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Slc28a1E9PXX9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Gm18025-201ENSMUST00000221733 862 ntBASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc28a1E9PXX9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Slc28a1E9PXX9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc28a1E9PXX9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc28a1E9PXX9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc28a1E9PXX9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc28a1E9PXX9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc28a1E9PXX9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.63■□□□□ 0.09
Slc28a1E9PXX9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.63■□□□□ 0.09
Slc28a1E9PXX9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Slc28a1E9PXX9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Slc28a1E9PXX9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc28a1E9PXX9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc28a1E9PXX9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Slc28a1E9PXX9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc28a1E9PXX9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Slc28a1E9PXX9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc28a1E9PXX9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Slc28a1E9PXX9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Gm10517-202ENSMUST00000192970 758 ntBASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.62■□□□□ 0.09
Slc28a1E9PXX9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 Gm37179-201ENSMUST00000194862 823 ntBASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 Gm37025-201ENSMUST00000195159 829 ntBASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 Gm42545-201ENSMUST00000202755 922 ntBASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Slc28a1E9PXX9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms