Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Gm12887B1AVM1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Gm12887B1AVM1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Gm12887B1AVM1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.46□□□□□ -0.26
Gm12887B1AVM1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Gm12887B1AVM1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.46□□□□□ -0.26
Gm12887B1AVM1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Gm12887B1AVM1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.46□□□□□ -0.26
Gm12887B1AVM1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Gm12887B1AVM1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Gm18671-201ENSMUST00000214826 683 ntBASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Gm12887B1AVM1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Gm12887B1AVM1 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.44□□□□□ -0.26
Gm12887B1AVM1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm12887B1AVM1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms