Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc194A0A140LIT1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc194A0A140LIT1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc194A0A140LIT1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc194A0A140LIT1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Gm715-201ENSMUST00000117865 831 ntBASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc194A0A140LIT1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.46■□□□□ 0.23
Ccdc194A0A140LIT1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc194A0A140LIT1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc194A0A140LIT1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc194A0A140LIT1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Ccdc194A0A140LIT1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc194A0A140LIT1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.22
Ccdc194A0A140LIT1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.45■□□□□ 0.22
Ccdc194A0A140LIT1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms