Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv5A0A0B4J1G9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv5A0A0B4J1G9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv5A0A0B4J1G9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv5A0A0B4J1G9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trbv5A0A0B4J1G9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trbv5A0A0B4J1G9 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms