Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Mir1199-201ENSMUST00000117015 119 ntBASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Gm7638-201ENSMUST00000121348 967 ntBASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9d-1A0A075B699 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Gm38027-201ENSMUST00000192315 235 ntBASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9d-1A0A075B699 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9d-1A0A075B699 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9d-1A0A075B699 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav9d-1A0A075B699 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9d-1A0A075B699 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9d-1A0A075B699 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms