Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Mir5126-201ENSMUST00000175513 77 ntBASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav8n-2A0A075B633 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trav8n-2A0A075B633 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8n-2A0A075B633 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.13■□□□□ 0.01
Trav8n-2A0A075B633 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav8n-2A0A075B633 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8n-2A0A075B633 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.13■□□□□ 0.01
Trav8n-2A0A075B633 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8n-2A0A075B633 Gm5364-201ENSMUST00000216789 889 ntBASIC15.13■□□□□ 0.01
Trav8n-2A0A075B633 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8n-2A0A075B633 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8n-2A0A075B633 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trav8n-2A0A075B633 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8n-2A0A075B633 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8n-2A0A075B633 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8n-2A0A075B633 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8n-2A0A075B633 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8n-2A0A075B633 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Gm4535-201ENSMUST00000182274 558 ntBASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Gm10355-201ENSMUST00000097146 517 ntBASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8n-2A0A075B633 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trav8n-2A0A075B633 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms