Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Gm42778-201ENSMUST00000199644 553 ntBASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Gm45417-201ENSMUST00000209533 758 ntBASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav16d-dv11A0A075B617 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16d-dv11A0A075B617 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16d-dv11A0A075B617 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16d-dv11A0A075B617 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16d-dv11A0A075B617 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16d-dv11A0A075B617 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16d-dv11A0A075B617 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16d-dv11A0A075B617 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16d-dv11A0A075B617 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.19□□□□□ -0.46
Trav16d-dv11A0A075B617 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16d-dv11A0A075B617 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms