Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6-6A0A075B603 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-6A0A075B603 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Gm13401-201ENSMUST00000117074 291 ntBASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Gm12896-201ENSMUST00000118430 226 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms