Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 ARF4P1-201ENST00000605447 541 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 AC242628.1-201ENST00000606810 391 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 AL773545.4-201ENST00000637262 310 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 AL513478.4-201ENST00000641636 310 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 OR5AC4P-202ENST00000642086 985 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 IPO8P1-201ENST00000455509 3109 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 DDX6P1-205ENST00000441966 1436 ntBASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRAPPC4Q9Y296 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 AC126755.2-208ENST00000327792 462 ntBASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 AC138969.1-213ENST00000331436 462 ntBASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 RANP4-201ENST00000413361 655 ntBASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 ZFAND6P1-201ENST00000434138 605 ntBASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 AC092691.2-201ENST00000461787 803 ntBASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 AC026979.1-201ENST00000492525 396 ntBASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 RPL29P14-201ENST00000495837 428 ntBASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 HMGB1P3-201ENST00000502802 616 ntBASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 RNU7-143P-201ENST00000516781 65 ntBASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 MRPL49P2-201ENST00000521066 465 ntBASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 AL109741.3-201ENST00000561748 592 ntBASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 RPL23AP87-202ENST00000573039 466 ntBASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 RN7SL600P-201ENST00000581811 299 ntBASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 AC020910.2-201ENST00000603635 610 ntBASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 AC104662.1-201ENST00000604448 511 ntBASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 MIR492-201ENST00000638676 116 ntBASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 CASC19-284ENST00000642142 1868 ntBASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.69□□□□□ -1.82
TRAPPC4Q9Y296 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 MARK2P15-201ENST00000432204 2186 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 RPS26P8-201ENST00000393490 348 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 RPS27AP11-201ENST00000402798 447 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AL034374.1-201ENST00000406329 351 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 Y_RNA.625-201ENST00000411256 107 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 PGBD4P8-201ENST00000412993 562 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AL450992.3-201ENST00000413192 568 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AC127526.1-201ENST00000417526 366 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 BMS1P19-201ENST00000433925 393 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 TPT1P12-201ENST00000448968 492 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 MTCO3P16-201ENST00000454456 754 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 NIPA2P2-201ENST00000496376 1083 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AC021146.1-201ENST00000511202 716 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 SNORA31.9-201ENST00000516429 84 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 HIGD1AP5-201ENST00000529959 259 ntBASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.68□□□□□ -1.82
TRAPPC4Q9Y296 AC135001.1-201ENST00000544546 283 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms