Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC110792.1-201ENST00000491826 472 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 SETP12-201ENST00000514068 805 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 RN7SKP141-201ENST00000516167 338 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 MYL12AP1-201ENST00000518490 515 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 IFITM8P-201ENST00000522529 394 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AC004923.2-201ENST00000529649 369 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AC233266.2-201ENST00000567067 528 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AC064801.1-201ENST00000612025 407 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AC007390.2-201ENST00000606229 3803 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 RNU1-108P-201ENST00000362556 161 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 RNA5SP502-201ENST00000362694 119 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 MIR92A2-201ENST00000385299 75 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 AC025750.1-201ENST00000399891 379 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 TAF9BP2-201ENST00000400856 499 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 RPL23AP48-201ENST00000406913 488 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 AL691449.1-201ENST00000426570 421 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 AL513321.1-201ENST00000441175 761 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 AL359073.1-201ENST00000448036 403 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 EIF4A1P11-201ENST00000451239 222 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 AC010460.1-201ENST00000507087 466 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 RNU7-143P-201ENST00000516781 65 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 AC103833.1-201ENST00000517442 172 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 HAUS1P3-201ENST00000523909 662 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 AL109741.3-201ENST00000561748 592 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 RPL23AP87-202ENST00000573039 466 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 AC135178.6-201ENST00000605314 398 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 AC004775.1-201ENST00000607389 753 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 MIR6868-201ENST00000611215 58 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 MIR6500-201ENST00000622700 86 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 AL451142.2-201ENST00000429076 2090 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 ZNF90P1-201ENST00000480493 1951 ntBASIC3.62□□□□□ -1.83
CLCF1Q9UBD9 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLCF1Q9UBD9 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.61□□□□□ -1.83
CLCF1Q9UBD9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLCF1Q9UBD9 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLCF1Q9UBD9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CLCF1Q9UBD9 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLCF1Q9UBD9 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLCF1Q9UBD9 RNU6-984P-201ENST00000363236 109 ntBASIC3.61□□□□□ -1.83
CLCF1Q9UBD9 SNORA62.2-201ENST00000364672 152 ntBASIC3.61□□□□□ -1.83
CLCF1Q9UBD9 MIR134-201ENST00000385258 73 ntBASIC3.61□□□□□ -1.83
CLCF1Q9UBD9 HSPD1P16-201ENST00000402302 394 ntBASIC3.61□□□□□ -1.83
CLCF1Q9UBD9 AL353692.2-201ENST00000407054 335 ntBASIC3.61□□□□□ -1.83
CLCF1Q9UBD9 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.61□□□□□ -1.83
CLCF1Q9UBD9 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.61□□□□□ -1.83
CLCF1Q9UBD9 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLCF1Q9UBD9 GEMIN8P3-201ENST00000445417 720 ntBASIC3.61□□□□□ -1.83
CLCF1Q9UBD9 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms