Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.89□□□□□ -1.79
CISHQ9NSE2 HMGN1P11-201ENST00000508668 303 ntBASIC3.89□□□□□ -1.79
CISHQ9NSE2 snoU109.6-201ENST00000516831 118 ntBASIC3.89□□□□□ -1.79
CISHQ9NSE2 RNU6-943P-201ENST00000516960 98 ntBASIC3.89□□□□□ -1.79
CISHQ9NSE2 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.89□□□□□ -1.79
CISHQ9NSE2 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.89□□□□□ -1.79
CISHQ9NSE2 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.89□□□□□ -1.79
CISHQ9NSE2 AC005972.3-201ENST00000606304 481 ntBASIC3.89□□□□□ -1.79
CISHQ9NSE2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.89□□□□□ -1.79
CISHQ9NSE2 AL732618.1-201ENST00000623251 301 ntBASIC3.89□□□□□ -1.79
CISHQ9NSE2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CISHQ9NSE2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CISHQ9NSE2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CISHQ9NSE2 MAPK10-372ENST00000641954 3413 ntBASIC3.89□□□□□ -1.79
CISHQ9NSE2 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CISHQ9NSE2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CISHQ9NSE2 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CISHQ9NSE2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CISHQ9NSE2 RAB9AP3-201ENST00000412737 573 ntBASIC3.88□□□□□ -1.79
CISHQ9NSE2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.88□□□□□ -1.79
CISHQ9NSE2 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CISHQ9NSE2 RPS3AP46-201ENST00000448352 682 ntBASIC3.88□□□□□ -1.79
CISHQ9NSE2 RAB9AP1-201ENST00000449393 573 ntBASIC3.88□□□□□ -1.79
CISHQ9NSE2 OR52Y1P-201ENST00000452418 828 ntBASIC3.88□□□□□ -1.79
CISHQ9NSE2 MTCO3P20-201ENST00000454926 688 ntBASIC3.88□□□□□ -1.79
CISHQ9NSE2 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.88□□□□□ -1.79
CISHQ9NSE2 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
CISHQ9NSE2 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.88□□□□□ -1.79
CISHQ9NSE2 MTCYBP19-201ENST00000517463 1124 ntBASIC3.88□□□□□ -1.79
CISHQ9NSE2 RANP9-201ENST00000519957 271 ntBASIC3.88□□□□□ -1.79
CISHQ9NSE2 MTCO1P49-201ENST00000523429 802 ntBASIC3.88□□□□□ -1.79
CISHQ9NSE2 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.88□□□□□ -1.79
CISHQ9NSE2 PDCD5P1-201ENST00000543528 309 ntBASIC3.88□□□□□ -1.79
CISHQ9NSE2 MTND2P17-201ENST00000550281 688 ntBASIC3.88□□□□□ -1.79
CISHQ9NSE2 HMGB3P26-201ENST00000560051 582 ntBASIC3.88□□□□□ -1.79
CISHQ9NSE2 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.88□□□□□ -1.79
CISHQ9NSE2 AC099489.2-201ENST00000574976 260 ntBASIC3.88□□□□□ -1.79
CISHQ9NSE2 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.88□□□□□ -1.79
CISHQ9NSE2 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.88□□□□□ -1.79
CISHQ9NSE2 AC020914.4-201ENST00000597690 277 ntBASIC3.88□□□□□ -1.79
CISHQ9NSE2 AL161637.1-201ENST00000622380 412 ntBASIC3.88□□□□□ -1.79
CISHQ9NSE2 AL356863.1-201ENST00000623378 1080 ntBASIC3.88□□□□□ -1.79
CISHQ9NSE2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.88□□□□□ -1.79
CISHQ9NSE2 OR6C71P-202ENST00000641886 1107 ntBASIC3.88□□□□□ -1.79
CISHQ9NSE2 AL732372.2-225ENST00000642124 456 ntBASIC3.88□□□□□ -1.79
CISHQ9NSE2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CISHQ9NSE2 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CISHQ9NSE2 ASNSP1-201ENST00000518311 1939 ntBASIC3.87□□□□□ -1.79
CISHQ9NSE2 AC007656.2-201ENST00000624902 4547 ntBASIC3.87□□□□□ -1.79
CISHQ9NSE2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.87□□□□□ -1.79
CISHQ9NSE2 AC022893.2-201ENST00000564832 3296 ntBASIC3.87□□□□□ -1.79
CISHQ9NSE2 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CISHQ9NSE2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CISHQ9NSE2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.87□□□□□ -1.79
CISHQ9NSE2 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CISHQ9NSE2 ZNF285B-201ENST00000561698 1767 ntBASIC3.87□□□□□ -1.79
CISHQ9NSE2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CISHQ9NSE2 AC090971.4-201ENST00000560291 1800 ntBASIC3.87□□□□□ -1.79
CISHQ9NSE2 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CISHQ9NSE2 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.87□□□□□ -1.79
CISHQ9NSE2 MIR554-201ENST00000384874 96 ntBASIC3.87□□□□□ -1.79
CISHQ9NSE2 AC104297.1-201ENST00000393779 870 ntBASIC3.87□□□□□ -1.79
CISHQ9NSE2 ATP5A1P2-201ENST00000412323 255 ntBASIC3.87□□□□□ -1.79
CISHQ9NSE2 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.87□□□□□ -1.79
CISHQ9NSE2 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.87□□□□□ -1.79
CISHQ9NSE2 AL133477.1-201ENST00000457472 514 ntBASIC3.87□□□□□ -1.79
CISHQ9NSE2 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.87□□□□□ -1.79
CISHQ9NSE2 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.87□□□□□ -1.79
CISHQ9NSE2 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.87□□□□□ -1.79
CISHQ9NSE2 RNU1-95P-201ENST00000516357 160 ntBASIC3.87□□□□□ -1.79
CISHQ9NSE2 SNORA26.10-201ENST00000516427 141 ntBASIC3.87□□□□□ -1.79
CISHQ9NSE2 RNU1-128P-201ENST00000516704 160 ntBASIC3.87□□□□□ -1.79
CISHQ9NSE2 AC023632.4-201ENST00000517783 191 ntBASIC3.87□□□□□ -1.79
CISHQ9NSE2 GTF2IP22-201ENST00000554443 182 ntBASIC3.87□□□□□ -1.79
CISHQ9NSE2 AL158196.1-201ENST00000616786 434 ntBASIC3.87□□□□□ -1.79
CISHQ9NSE2 AC039056.2-201ENST00000622261 511 ntBASIC3.87□□□□□ -1.79
CISHQ9NSE2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.87□□□□□ -1.79
CISHQ9NSE2 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CISHQ9NSE2 CR381670.1-201ENST00000624291 1693 ntBASIC3.87□□□□□ -1.79
CISHQ9NSE2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CISHQ9NSE2 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CISHQ9NSE2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CISHQ9NSE2 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CISHQ9NSE2 AC073073.2-201ENST00000609827 2578 ntBASIC3.86□□□□□ -1.79
CISHQ9NSE2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CISHQ9NSE2 AC007823.1-201ENST00000569932 1566 ntBASIC3.86□□□□□ -1.79
CISHQ9NSE2 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CISHQ9NSE2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CISHQ9NSE2 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CISHQ9NSE2 SDCBPP2-201ENST00000424643 885 ntBASIC3.86□□□□□ -1.79
CISHQ9NSE2 RPS26P47-201ENST00000427219 348 ntBASIC3.86□□□□□ -1.79
CISHQ9NSE2 AC018644.1-201ENST00000429934 551 ntBASIC3.86□□□□□ -1.79
CISHQ9NSE2 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.86□□□□□ -1.79
CISHQ9NSE2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.86□□□□□ -1.79
CISHQ9NSE2 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CISHQ9NSE2 AC022431.1-201ENST00000450941 438 ntBASIC3.86□□□□□ -1.79
CISHQ9NSE2 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.86□□□□□ -1.79
CISHQ9NSE2 RPL23AP12-201ENST00000467573 473 ntBASIC3.86□□□□□ -1.79
CISHQ9NSE2 NPM1P17-201ENST00000479221 602 ntBASIC3.86□□□□□ -1.79
CISHQ9NSE2 AL133372.1-201ENST00000493565 745 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms