Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC103858.2-201ENST00000621471 543 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 AP003072.5-201ENST00000623872 773 ntBASIC5.16□□□□□ -1.58
USP47Q96K76 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
USP47Q96K76 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
USP47Q96K76 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.15□□□□□ -1.58
USP47Q96K76 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.15□□□□□ -1.58
USP47Q96K76 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.15□□□□□ -1.59
USP47Q96K76 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.15□□□□□ -1.59
USP47Q96K76 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
USP47Q96K76 AP000907.1-201ENST00000428428 510 ntBASIC5.15□□□□□ -1.59
USP47Q96K76 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
USP47Q96K76 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
USP47Q96K76 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.15□□□□□ -1.59
USP47Q96K76 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.15□□□□□ -1.59
USP47Q96K76 AC074250.1-201ENST00000511117 192 ntBASIC5.15□□□□□ -1.59
USP47Q96K76 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.15□□□□□ -1.59
USP47Q96K76 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.15□□□□□ -1.59
USP47Q96K76 TRAV15-201ENST00000556680 249 ntBASIC5.15□□□□□ -1.59
USP47Q96K76 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
USP47Q96K76 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
USP47Q96K76 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
USP47Q96K76 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP47Q96K76 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USP47Q96K76 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP47Q96K76 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USP47Q96K76 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
USP47Q96K76 NCAPGP1-201ENST00000505112 1814 ntBASIC5.14□□□□□ -1.59
USP47Q96K76 SNORD9-201ENST00000362566 104 ntBASIC5.14□□□□□ -1.59
USP47Q96K76 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.14□□□□□ -1.59
USP47Q96K76 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.14□□□□□ -1.59
USP47Q96K76 AL035423.1-201ENST00000420331 213 ntBASIC5.14□□□□□ -1.59
USP47Q96K76 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USP47Q96K76 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.14□□□□□ -1.59
USP47Q96K76 OR52Y1P-201ENST00000452418 828 ntBASIC5.14□□□□□ -1.59
USP47Q96K76 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.14□□□□□ -1.59
USP47Q96K76 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.14□□□□□ -1.59
USP47Q96K76 SNORA70.18-201ENST00000516696 98 ntBASIC5.14□□□□□ -1.59
USP47Q96K76 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.14□□□□□ -1.59
USP47Q96K76 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.14□□□□□ -1.59
USP47Q96K76 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.14□□□□□ -1.59
USP47Q96K76 ZNF415P1-201ENST00000582279 1166 ntBASIC5.14□□□□□ -1.59
USP47Q96K76 AL163642.2-201ENST00000604722 1019 ntBASIC5.14□□□□□ -1.59
USP47Q96K76 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.14□□□□□ -1.59
USP47Q96K76 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
USP47Q96K76 AC017007.4-201ENST00000503353 1352 ntBASIC5.13□□□□□ -1.59
USP47Q96K76 MTCO1P12-201ENST00000414273 1543 ntBASIC5.13□□□□□ -1.59
USP47Q96K76 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
USP47Q96K76 SAGE2P-201ENST00000420011 2126 ntBASIC5.13□□□□□ -1.59
USP47Q96K76 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.13□□□□□ -1.59
USP47Q96K76 RNA5SP322-201ENST00000363617 119 ntBASIC5.13□□□□□ -1.59
USP47Q96K76 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.13□□□□□ -1.59
USP47Q96K76 HSPE1P8-201ENST00000406997 288 ntBASIC5.13□□□□□ -1.59
USP47Q96K76 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.13□□□□□ -1.59
USP47Q96K76 AC244033.1-201ENST00000426826 870 ntBASIC5.13□□□□□ -1.59
USP47Q96K76 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.13□□□□□ -1.59
USP47Q96K76 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.13□□□□□ -1.59
USP47Q96K76 AC099563.1-201ENST00000456086 418 ntBASIC5.13□□□□□ -1.59
USP47Q96K76 AC104849.1-201ENST00000462623 405 ntBASIC5.13□□□□□ -1.59
USP47Q96K76 HMGN1P11-201ENST00000508668 303 ntBASIC5.13□□□□□ -1.59
USP47Q96K76 AC104619.4-201ENST00000510773 249 ntBASIC5.13□□□□□ -1.59
USP47Q96K76 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.13□□□□□ -1.59
USP47Q96K76 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.13□□□□□ -1.59
USP47Q96K76 AC037471.2-201ENST00000564941 598 ntBASIC5.13□□□□□ -1.59
USP47Q96K76 KLKP1-201ENST00000595979 403 ntBASIC5.13□□□□□ -1.59
USP47Q96K76 AL442067.2-201ENST00000614033 363 ntBASIC5.13□□□□□ -1.59
USP47Q96K76 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.13□□□□□ -1.59
USP47Q96K76 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
USP47Q96K76 MTND5P1-201ENST00000445440 1375 ntBASIC5.12□□□□□ -1.59
USP47Q96K76 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
USP47Q96K76 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.12□□□□□ -1.59
USP47Q96K76 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
USP47Q96K76 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
USP47Q96K76 SDCBPP2-201ENST00000424643 885 ntBASIC5.12□□□□□ -1.59
USP47Q96K76 HSPD1P21-201ENST00000436541 245 ntBASIC5.12□□□□□ -1.59
USP47Q96K76 AC005726.1-201ENST00000494679 427 ntBASIC5.12□□□□□ -1.59
USP47Q96K76 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.12□□□□□ -1.59
USP47Q96K76 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.12□□□□□ -1.59
USP47Q96K76 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.12□□□□□ -1.59
USP47Q96K76 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.12□□□□□ -1.59
USP47Q96K76 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.12□□□□□ -1.59
USP47Q96K76 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.12□□□□□ -1.59
USP47Q96K76 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
USP47Q96K76 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.12□□□□□ -1.59
USP47Q96K76 VN1R92P-201ENST00000598511 928 ntBASIC5.12□□□□□ -1.59
USP47Q96K76 AC092354.2-201ENST00000607786 514 ntBASIC5.12□□□□□ -1.59
USP47Q96K76 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP47Q96K76 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
USP47Q96K76 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
USP47Q96K76 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.11□□□□□ -1.59
USP47Q96K76 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USP47Q96K76 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
USP47Q96K76 RNU1-89P-201ENST00000384592 164 ntBASIC5.11□□□□□ -1.59
USP47Q96K76 DBIP2-201ENST00000419076 262 ntBASIC5.11□□□□□ -1.59
USP47Q96K76 AC245054.1-201ENST00000420944 258 ntBASIC5.11□□□□□ -1.59
USP47Q96K76 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.11□□□□□ -1.59
USP47Q96K76 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.11□□□□□ -1.59
USP47Q96K76 CYCSP4-201ENST00000429682 331 ntBASIC5.11□□□□□ -1.59
USP47Q96K76 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.11□□□□□ -1.59
USP47Q96K76 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.11□□□□□ -1.59
USP47Q96K76 PPIAP3-201ENST00000450588 505 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms