Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL451044.1-201ENST00000604867 238 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC095038.2-201ENST00000621464 1070 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 TNPO1P3-201ENST00000436471 2662 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC108941.1-201ENST00000502853 530 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC006116.10-201ENST00000591836 581 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC006077.1-201ENST00000604746 343 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 MIR432-201ENST00000606207 94 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AL158196.1-201ENST00000616786 434 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 CR392039.4-201ENST00000624968 501 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC002546.1-201ENST00000588041 2504 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 NACA3P-201ENST00000359690 648 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AL121834.1-202ENST00000404494 277 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 TCEA1P2-201ENST00000420496 906 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AL136097.1-201ENST00000456945 913 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC110792.1-201ENST00000491826 472 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 ALDH7A1P3-201ENST00000492517 345 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 RPL31P61-201ENST00000496160 376 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 HMGB3P13-201ENST00000511263 607 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC090281.1-201ENST00000523019 276 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 RNU1-33P-201ENST00000364249 162 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 CBX1P3-201ENST00000413296 527 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 SETP14-201ENST00000497538 873 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AC069240.1-201ENST00000548774 375 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 MIR4325-201ENST00000583049 90 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AC006504.3-201ENST00000586818 523 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AL031985.2-201ENST00000600955 480 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AC138932.5-201ENST00000617759 563 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AP005019.3-201ENST00000620418 560 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AC063923.1-201ENST00000478982 1619 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 OR5AQ1P-202ENST00000641257 1534 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 NPM1P25-201ENST00000429734 854 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AC005008.1-201ENST00000456151 612 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AC074276.2-201ENST00000619891 348 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 RN7SKP199-201ENST00000410325 305 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 YWHAEP5-201ENST00000431545 765 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 GEMIN8P3-201ENST00000445417 720 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AC093311.1-201ENST00000506586 2021 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 IGKV2-38-201ENST00000517443 247 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 QTRT1P1-201ENST00000604344 1078 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AL031666.3-201ENST00000609320 1006 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AC119744.1-201ENST00000454746 1715 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AC096664.2-201ENST00000411843 406 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AC138409.2-202ENST00000507274 458 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AC005476.1-201ENST00000554427 397 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 AC005412.1-201ENST00000580812 1049 ntBASIC1.16□□□□□ -2.22
SYNE1Q8NF91 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC1.16□□□□□ -2.22
SYNE1Q8NF91 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms