Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A3Q8N4M1 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 Y_RNA.6-201ENST00000362350 114 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 RNU4-21P-201ENST00000362802 126 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 RNA5SP479-201ENST00000364858 117 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 SNORA70F-201ENST00000384142 135 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 RNU6-1119P-201ENST00000384349 108 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 DEFB108C-201ENST00000400154 252 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 SNORA77-201ENST00000408716 125 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 GPS2P1-201ENST00000411761 986 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 FCF1P9-201ENST00000412546 282 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC105402.1-201ENST00000413336 545 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 MTND1P23-201ENST00000416931 372 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 RPL30P16-201ENST00000419341 429 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 MTND4P25-201ENST00000441039 533 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC010733.1-201ENST00000451515 401 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 CEACAMP6-201ENST00000452007 574 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 CALM1P2-201ENST00000452941 448 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC109486.1-201ENST00000486833 374 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 DSTNP2-201ENST00000504533 515 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC073358.1-201ENST00000505671 684 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC091965.2-201ENST00000512324 613 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 RN7SKP122-201ENST00000515923 296 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AP000873.5-201ENST00000533906 236 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 CCNG2P1-201ENST00000549521 1000 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AL512347.1-201ENST00000566420 503 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 TVP23CP2-201ENST00000571473 623 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC087683.1-201ENST00000591187 441 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC079089.3-201ENST00000603094 673 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC006363.1-201ENST00000603806 463 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AP000238.1-201ENST00000608759 426 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC097505.1-201ENST00000610199 565 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC008083.4-201ENST00000615076 444 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC068137.3-201ENST00000639191 341 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC073869.6-201ENST00000640656 341 ntBASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A3Q8N4M1 AC097063.1-201ENST00000426714 1797 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AC092376.2-201ENST00000622621 4116 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 METTL21EP-201ENST00000298105 713 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 Y_RNA.41-201ENST00000362646 102 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 MIR142-201ENST00000384835 87 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AL133264.1-201ENST00000407157 562 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 RAP1BP3-201ENST00000407180 549 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 USP9YP33-201ENST00000412220 421 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 PGBD4P8-201ENST00000412993 562 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms