Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 PLGLA-201ENST00000465668 449 ntBASIC5.55□□□□□ -1.52
VPS8Q8N3P4 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
VPS8Q8N3P4 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS8Q8N3P4 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS8Q8N3P4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS8Q8N3P4 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS8Q8N3P4 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS8Q8N3P4 MIR7975-201ENST00000619350 68 ntBASIC5.55□□□□□ -1.52
VPS8Q8N3P4 AC022149.2-201ENST00000621061 203 ntBASIC5.55□□□□□ -1.52
VPS8Q8N3P4 AL357559.1-201ENST00000622228 274 ntBASIC5.55□□□□□ -1.52
VPS8Q8N3P4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS8Q8N3P4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS8Q8N3P4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS8Q8N3P4 MTND4P26-201ENST00000415971 1359 ntBASIC5.54□□□□□ -1.52
VPS8Q8N3P4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS8Q8N3P4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS8Q8N3P4 RNU6-761P-201ENST00000384148 107 ntBASIC5.54□□□□□ -1.52
VPS8Q8N3P4 RPS24P12-201ENST00000402084 394 ntBASIC5.54□□□□□ -1.52
VPS8Q8N3P4 PRDX3P3-201ENST00000447765 522 ntBASIC5.54□□□□□ -1.52
VPS8Q8N3P4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS8Q8N3P4 DUXAP2-201ENST00000519198 589 ntBASIC5.54□□□□□ -1.52
VPS8Q8N3P4 AL121576.1-201ENST00000556055 276 ntBASIC5.54□□□□□ -1.52
VPS8Q8N3P4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS8Q8N3P4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS8Q8N3P4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS8Q8N3P4 AC012468.1-201ENST00000604888 430 ntBASIC5.54□□□□□ -1.52
VPS8Q8N3P4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.54□□□□□ -1.52
VPS8Q8N3P4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS8Q8N3P4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS8Q8N3P4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS8Q8N3P4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS8Q8N3P4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS8Q8N3P4 PRO1804-201ENST00000623780 2050 ntBASIC5.53□□□□□ -1.52
VPS8Q8N3P4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS8Q8N3P4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
VPS8Q8N3P4 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS8Q8N3P4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS8Q8N3P4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS8Q8N3P4 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS8Q8N3P4 HMGB1P16-201ENST00000447155 540 ntBASIC5.53□□□□□ -1.52
VPS8Q8N3P4 ANP32BP2-201ENST00000454525 545 ntBASIC5.53□□□□□ -1.52
VPS8Q8N3P4 AC005229.2-201ENST00000456995 399 ntBASIC5.53□□□□□ -1.52
VPS8Q8N3P4 RPL21P13-201ENST00000488305 481 ntBASIC5.53□□□□□ -1.52
VPS8Q8N3P4 MIR3944-201ENST00000581277 108 ntBASIC5.53□□□□□ -1.52
VPS8Q8N3P4 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.53□□□□□ -1.52
VPS8Q8N3P4 AL161756.2-201ENST00000604597 246 ntBASIC5.53□□□□□ -1.52
VPS8Q8N3P4 HMGB1P50-201ENST00000605814 607 ntBASIC5.53□□□□□ -1.52
VPS8Q8N3P4 AC233968.1-201ENST00000611212 1300 ntBASIC5.53□□□□□ -1.52
VPS8Q8N3P4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS8Q8N3P4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
VPS8Q8N3P4 AC073073.2-201ENST00000609827 2578 ntBASIC5.52□□□□□ -1.53
VPS8Q8N3P4 SNORA9-201ENST00000384215 133 ntBASIC5.52□□□□□ -1.53
VPS8Q8N3P4 MIR218-2-201ENST00000385006 110 ntBASIC5.52□□□□□ -1.53
VPS8Q8N3P4 ZNF603P-201ENST00000405613 487 ntBASIC5.52□□□□□ -1.53
VPS8Q8N3P4 RPS7P15-201ENST00000415804 584 ntBASIC5.52□□□□□ -1.53
VPS8Q8N3P4 AC002075.2-201ENST00000425207 252 ntBASIC5.52□□□□□ -1.53
VPS8Q8N3P4 AC099560.2-201ENST00000457554 255 ntBASIC5.52□□□□□ -1.53
VPS8Q8N3P4 AP000942.1-201ENST00000463969 747 ntBASIC5.52□□□□□ -1.53
VPS8Q8N3P4 RPS4XP10-201ENST00000465034 731 ntBASIC5.52□□□□□ -1.53
VPS8Q8N3P4 AC093663.1-201ENST00000497190 394 ntBASIC5.52□□□□□ -1.53
VPS8Q8N3P4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS8Q8N3P4 AC005798.1-201ENST00000513715 387 ntBASIC5.52□□□□□ -1.53
VPS8Q8N3P4 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS8Q8N3P4 AC107016.1-201ENST00000550463 337 ntBASIC5.52□□□□□ -1.53
VPS8Q8N3P4 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS8Q8N3P4 AC019176.2-201ENST00000611579 315 ntBASIC5.52□□□□□ -1.53
VPS8Q8N3P4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS8Q8N3P4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS8Q8N3P4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
VPS8Q8N3P4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS8Q8N3P4 AC006989.1-201ENST00000427212 131 ntBASIC5.51□□□□□ -1.53
VPS8Q8N3P4 RPL7P4-203ENST00000430239 730 ntBASIC5.51□□□□□ -1.53
VPS8Q8N3P4 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS8Q8N3P4 AC025518.1-201ENST00000479856 347 ntBASIC5.51□□□□□ -1.53
VPS8Q8N3P4 WBP1LP4-201ENST00000505043 344 ntBASIC5.51□□□□□ -1.53
VPS8Q8N3P4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS8Q8N3P4 AP000926.4-201ENST00000527351 454 ntBASIC5.51□□□□□ -1.53
VPS8Q8N3P4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.51□□□□□ -1.53
VPS8Q8N3P4 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.51□□□□□ -1.53
VPS8Q8N3P4 AC005412.1-201ENST00000580812 1049 ntBASIC5.51□□□□□ -1.53
VPS8Q8N3P4 AC007179.3-201ENST00000604976 235 ntBASIC5.51□□□□□ -1.53
VPS8Q8N3P4 AL355365.1-201ENST00000616480 294 ntBASIC5.51□□□□□ -1.53
VPS8Q8N3P4 AL158062.1-201ENST00000619632 745 ntBASIC5.51□□□□□ -1.53
VPS8Q8N3P4 AC127502.3-201ENST00000636170 1206 ntBASIC5.51□□□□□ -1.53
VPS8Q8N3P4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS8Q8N3P4 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 RNA5SP197-201ENST00000363357 119 ntBASIC5.5□□□□□ -1.53
VPS8Q8N3P4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 LAP3P1-201ENST00000403648 294 ntBASIC5.5□□□□□ -1.53
VPS8Q8N3P4 RNU2-65P-201ENST00000410162 185 ntBASIC5.5□□□□□ -1.53
VPS8Q8N3P4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 DPY19L1P2-201ENST00000426647 915 ntBASIC5.5□□□□□ -1.53
VPS8Q8N3P4 NPM1P48-201ENST00000436002 853 ntBASIC5.5□□□□□ -1.53
VPS8Q8N3P4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 RPS29P31-201ENST00000446147 164 ntBASIC5.5□□□□□ -1.53
VPS8Q8N3P4 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms