Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 AC068538.1-201ENST00000376856 336 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 RNA5SP317-201ENST00000410176 116 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 Y_RNA.625-201ENST00000411256 107 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 RNA5SP311-201ENST00000411290 116 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 AC073069.1-201ENST00000428657 441 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 TBCAP1-201ENST00000436520 327 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 RPL7P24-201ENST00000493052 752 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 OR52A4P-203ENST00000498233 1014 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 NDUFB4P9-201ENST00000511646 388 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 RNA5SP315-201ENST00000516340 116 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 MIR2114-201ENST00000516645 80 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 RNA5SP312-201ENST00000517068 116 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 AC104997.1-201ENST00000519761 717 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 HIGD1AP5-201ENST00000529959 259 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 AC015911.5-201ENST00000587076 451 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 AC019131.2-201ENST00000609071 870 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 C2orf27A-204ENST00000623058 969 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 AC004943.3-201ENST00000624116 600 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 UBE3AP2-201ENST00000429033 2259 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 MFSD8-220ENST00000641243 1422 ntBASIC4.38□□□□□ -1.71
CCDC65Q8IXS2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 MAPK10-373ENST00000641983 6772 ntBASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 BDP1P-201ENST00000582658 1990 ntBASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 ATP5HP2-201ENST00000433885 485 ntBASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 Z99127.2-201ENST00000441426 334 ntBASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 RANP8-201ENST00000444720 713 ntBASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 NIPA2P2-201ENST00000496376 1083 ntBASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 AC067904.2-201ENST00000517322 1283 ntBASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 YPEL5P3-201ENST00000547227 352 ntBASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 AC068714.1-201ENST00000559623 800 ntBASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.37□□□□□ -1.71
CCDC65Q8IXS2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 AL356806.1-201ENST00000422524 916 ntBASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 AC017083.1-201ENST00000428093 483 ntBASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 BMS1P19-201ENST00000433925 393 ntBASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 RPL21P11-201ENST00000461458 483 ntBASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 AC018635.1-201ENST00000468292 1030 ntBASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 RPL23AP71-201ENST00000470966 469 ntBASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 AC069499.1-201ENST00000489433 509 ntBASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 AC087369.1-201ENST00000520775 996 ntBASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 AC022784.5-201ENST00000522241 437 ntBASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 OR4A12P-201ENST00000530847 918 ntBASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.36□□□□□ -1.71
CCDC65Q8IXS2 AC092868.3-201ENST00000560515 784 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms