Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC025674.1-201ENST00000507074 324 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC098799.2-201ENST00000509466 868 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 UBE2FP2-201ENST00000566646 462 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 VN1R79P-201ENST00000593540 513 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 BNIP3P23-201ENST00000599655 511 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC012616.1-201ENST00000600294 197 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC233280.2-201ENST00000603917 1070 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 PRELID3BP8-201ENST00000604148 295 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC104985.2-201ENST00000620598 500 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC124864.2-201ENST00000624736 186 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC011933.2-201ENST00000578539 2790 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AL031595.2-201ENST00000624215 19071 ntBASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM48Q8IWZ4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 RN7SKP6-201ENST00000364795 319 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AC005522.1-201ENST00000395416 346 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AL009179.1-201ENST00000406085 265 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 Y_RNA.598-201ENST00000410480 95 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 RBMY2KP-201ENST00000418221 992 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AC233728.2-201ENST00000425348 757 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 MTND4P28-201ENST00000426217 387 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 VTI1BP4-201ENST00000427516 527 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 MTND3P23-201ENST00000431980 347 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 MTND4LP10-201ENST00000435146 291 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 MTATP6P30-201ENST00000443540 664 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 CYCSP51-201ENST00000443545 318 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 GDI2P2-201ENST00000445131 608 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 MTND2P24-201ENST00000453434 806 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 RPL23AP12-201ENST00000467573 473 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 RN7SL214P-201ENST00000487317 265 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 RN7SL547P-201ENST00000490793 290 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AC091133.4-201ENST00000511142 308 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 RNU6-150P-201ENST00000516237 95 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 RNU6-528P-201ENST00000516926 100 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 IGLV3-24-201ENST00000517477 197 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 IGLV2-28-201ENST00000520681 304 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 IGKV2-18-201ENST00000522607 343 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 RARSP1-201ENST00000542842 1418 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 H3F3BP2-201ENST00000583907 357 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AL161729.4-201ENST00000604650 476 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 MIR3688-2-201ENST00000636963 87 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 AC090017.1-201ENST00000548612 1779 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms