Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 AC018926.3-201ENST00000618841 406 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 AP003400.6-201ENST00000624698 740 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 AL133243.3-201ENST00000617415 3004 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 AC008432.1-201ENST00000615912 1320 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 AC016588.2-201ENST00000632484 3021 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 XPOTP1-201ENST00000443317 2398 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC139713.2-214ENST00000642059 1811 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 OR5P1P-201ENST00000299512 925 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 SNORA51.12-201ENST00000384448 134 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 RPL23AP59-201ENST00000399415 461 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC008173.1-201ENST00000418901 264 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC004552.1-201ENST00000419089 348 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 MTATP6P11-201ENST00000428071 670 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC074367.1-201ENST00000438685 1125 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 ELOCP8-201ENST00000439309 332 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 ELOCP15-201ENST00000442090 332 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 RPL6P5-201ENST00000445678 828 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 TPT1P13-201ENST00000449760 499 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 RPL7P55-201ENST00000450522 746 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 RPL7P32-201ENST00000457119 744 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 RPL35AP15-201ENST00000468042 339 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 RPS26P3-201ENST00000470205 348 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC073522.1-201ENST00000483312 377 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC090543.2-201ENST00000483963 348 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC004057.1-201ENST00000485827 348 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC017037.1-201ENST00000508460 471 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 RN7SKP96-201ENST00000516948 297 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 OR5BC1P-201ENST00000529327 739 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC074029.1-201ENST00000552531 1044 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC068790.4-201ENST00000602474 263 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC079587.1-201ENST00000603846 277 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC005191.1-201ENST00000603950 358 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC007546.1-201ENST00000619452 559 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC008785.1-201ENST00000624475 456 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 FP325313.1-201ENST00000638228 703 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC132825.7-201ENST00000638744 335 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 MFSD8-213ENST00000641134 1327 ntBASIC3.89□□□□□ -1.79
NIPAL3Q6P499 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NIPAL3Q6P499 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AL512646.1-201ENST00000269395 1077 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 MIR331-201ENST00000362302 94 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 SNORD56.4-201ENST00000363883 71 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AC097374.1-203ENST00000400783 485 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 PRRC2CP1-201ENST00000404428 159 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AL158050.1-201ENST00000416077 457 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 NUP35P2-201ENST00000416748 943 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 NANOGP6-201ENST00000429190 847 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 RPL17P35-201ENST00000432217 549 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AL132765.1-201ENST00000434165 553 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AL645939.1-201ENST00000453429 797 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 RPL23AP24-201ENST00000458203 385 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 RPL37P6-202ENST00000464216 403 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AC104164.2-201ENST00000496953 495 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AC083829.1-201ENST00000503756 657 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AC025554.1-201ENST00000505641 188 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms