Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC007686.1-201ENST00000488511 463 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 AC108157.1-201ENST00000510511 539 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 AC008958.1-201ENST00000511047 682 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 AC021146.1-201ENST00000511202 716 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RFX4Q33E94 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RFX4Q33E94 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.71□□□□□ -1.82
RFX4Q33E94 AC023158.1-201ENST00000561632 1025 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.71□□□□□ -1.82
RFX4Q33E94 AC022655.2-201ENST00000577280 318 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 AL034351.1-201ENST00000605288 668 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 AL355802.4-201ENST00000607635 548 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 AC012467.1-201ENST00000607740 256 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.71□□□□□ -1.82
RFX4Q33E94 AC116651.1-201ENST00000609724 556 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 CR589904.2-201ENST00000612533 440 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 AC016957.2-201ENST00000616998 848 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 AL162233.1-201ENST00000620014 944 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 AC124312.6-202ENST00000623624 418 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 AP003497.2-201ENST00000624220 967 ntBASIC3.71□□□□□ -1.82
RFX4Q33E94 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.71□□□□□ -1.82
RFX4Q33E94 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.71□□□□□ -1.82
RFX4Q33E94 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.71□□□□□ -1.82
RFX4Q33E94 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFX4Q33E94 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.7□□□□□ -1.82
RFX4Q33E94 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFX4Q33E94 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFX4Q33E94 XIAPP3-201ENST00000312918 795 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 SNORA60-201ENST00000362396 134 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 RNU1-132P-201ENST00000364300 164 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 RNU6-532P-201ENST00000384318 107 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 RPS4XP9-201ENST00000405151 780 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.7□□□□□ -1.82
RFX4Q33E94 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.7□□□□□ -1.82
RFX4Q33E94 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.7□□□□□ -1.82
RFX4Q33E94 CR848007.2-201ENST00000424918 787 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 OR5AW1P-201ENST00000426334 1006 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.7□□□□□ -1.82
RFX4Q33E94 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.7□□□□□ -1.82
RFX4Q33E94 BMS1P19-201ENST00000433925 393 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 RPS26P40-201ENST00000435209 294 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 SKP1P1-201ENST00000438081 489 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RFX4Q33E94 XKRY2-201ENST00000442362 1093 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 AC006011.1-201ENST00000442758 349 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 RPS15AP29-201ENST00000445539 400 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 AL500527.1-201ENST00000448532 255 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.7□□□□□ -1.82
RFX4Q33E94 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.7□□□□□ -1.82
RFX4Q33E94 Z95152.1-201ENST00000453556 656 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 RNA5SP246-201ENST00000458909 119 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 AC010683.1-201ENST00000473673 378 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 RPL7P24-201ENST00000493052 752 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.7□□□□□ -1.82
RFX4Q33E94 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.7□□□□□ -1.82
RFX4Q33E94 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
RFX4Q33E94 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.7□□□□□ -1.82
RFX4Q33E94 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.7□□□□□ -1.82
RFX4Q33E94 AL109741.3-201ENST00000561748 592 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.7□□□□□ -1.82
RFX4Q33E94 MIR4458-201ENST00000578872 75 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 AC244505.7-201ENST00000599675 272 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 AC234771.5-201ENST00000600161 514 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 MTCO3P22-201ENST00000603219 784 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 AL161729.3-201ENST00000603533 673 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 AC020910.2-201ENST00000603635 610 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 Z82195.1-201ENST00000604558 398 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 AC242628.1-201ENST00000606810 391 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 AL354696.1-201ENST00000614652 497 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 AC123768.4-201ENST00000616244 701 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 U7.8-201ENST00000619968 63 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 AC073342.3-201ENST00000624211 193 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.7□□□□□ -1.82
RFX4Q33E94 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.7□□□□□ -1.82
RFX4Q33E94 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.7□□□□□ -1.82
RFX4Q33E94 MTCO1P14-201ENST00000441695 1559 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 CR381670.1-201ENST00000624291 1693 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFX4Q33E94 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.7□□□□□ -1.82
RFX4Q33E94 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
RFX4Q33E94 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFX4Q33E94 AC073429.2-201ENST00000569694 1444 ntBASIC3.7□□□□□ -1.82
RFX4Q33E94 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RFX4Q33E94 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RFX4Q33E94 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RFX4Q33E94 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
RFX4Q33E94 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RFX4Q33E94 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RFX4Q33E94 RNA5SP447-201ENST00000363749 119 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RFX4Q33E94 Z86062.1-201ENST00000406773 777 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 HSPE1P8-201ENST00000406997 288 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 Z98941.1-201ENST00000407764 100 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 RPL37P18-201ENST00000411602 243 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.69□□□□□ -1.82
RFX4Q33E94 RANP4-201ENST00000413361 655 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 RPL21P109-201ENST00000422213 475 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms