Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.48□□□□□ -1.85
H3F3AP84243 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.48□□□□□ -1.85
H3F3AP84243 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.48□□□□□ -1.85
H3F3AP84243 MIR4286-201ENST00000580651 93 ntBASIC3.48□□□□□ -1.85
H3F3AP84243 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.48□□□□□ -1.85
H3F3AP84243 VN1R79P-201ENST00000593540 513 ntBASIC3.48□□□□□ -1.85
H3F3AP84243 AL606490.9-201ENST00000603331 271 ntBASIC3.48□□□□□ -1.85
H3F3AP84243 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.48□□□□□ -1.85
H3F3AP84243 AC019131.2-201ENST00000609071 870 ntBASIC3.48□□□□□ -1.85
H3F3AP84243 AC239803.2-201ENST00000610161 430 ntBASIC3.48□□□□□ -1.85
H3F3AP84243 AC145207.9-201ENST00000623802 325 ntBASIC3.48□□□□□ -1.85
H3F3AP84243 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.48□□□□□ -1.85
H3F3AP84243 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.48□□□□□ -1.85
H3F3AP84243 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.48□□□□□ -1.85
H3F3AP84243 HSPA8P1-201ENST00000425843 1833 ntBASIC3.48□□□□□ -1.85
H3F3AP84243 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
H3F3AP84243 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
H3F3AP84243 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
H3F3AP84243 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.48□□□□□ -1.85
H3F3AP84243 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
H3F3AP84243 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
H3F3AP84243 MTCO1P14-201ENST00000441695 1559 ntBASIC3.47□□□□□ -1.85
H3F3AP84243 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
H3F3AP84243 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
H3F3AP84243 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.47□□□□□ -1.85
H3F3AP84243 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.47□□□□□ -1.85
H3F3AP84243 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.47□□□□□ -1.85
H3F3AP84243 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
H3F3AP84243 TRGV7-201ENST00000427089 353 ntBASIC3.47□□□□□ -1.85
H3F3AP84243 USP12PY-201ENST00000427677 1064 ntBASIC3.47□□□□□ -1.85
H3F3AP84243 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.47□□□□□ -1.85
H3F3AP84243 RANP8-201ENST00000444720 713 ntBASIC3.47□□□□□ -1.85
H3F3AP84243 YWHAQP9-201ENST00000445891 512 ntBASIC3.47□□□□□ -1.85
H3F3AP84243 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.47□□□□□ -1.85
H3F3AP84243 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.47□□□□□ -1.85
H3F3AP84243 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.47□□□□□ -1.85
H3F3AP84243 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.47□□□□□ -1.85
H3F3AP84243 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.47□□□□□ -1.85
H3F3AP84243 RPL21P71-201ENST00000465598 459 ntBASIC3.47□□□□□ -1.85
H3F3AP84243 AC069499.1-201ENST00000489433 509 ntBASIC3.47□□□□□ -1.85
H3F3AP84243 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.47□□□□□ -1.85
H3F3AP84243 AC026726.1-201ENST00000512859 601 ntBASIC3.47□□□□□ -1.85
H3F3AP84243 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.47□□□□□ -1.85
H3F3AP84243 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.47□□□□□ -1.85
H3F3AP84243 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.47□□□□□ -1.85
H3F3AP84243 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.47□□□□□ -1.85
H3F3AP84243 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.47□□□□□ -1.85
H3F3AP84243 OR4A12P-201ENST00000530847 918 ntBASIC3.47□□□□□ -1.85
H3F3AP84243 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
H3F3AP84243 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.47□□□□□ -1.85
H3F3AP84243 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.47□□□□□ -1.85
H3F3AP84243 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
H3F3AP84243 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.47□□□□□ -1.85
H3F3AP84243 AL109741.3-201ENST00000561748 592 ntBASIC3.47□□□□□ -1.85
H3F3AP84243 AC120057.2-201ENST00000571520 271 ntBASIC3.47□□□□□ -1.85
H3F3AP84243 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
H3F3AP84243 AC083899.3-201ENST00000603413 594 ntBASIC3.47□□□□□ -1.85
H3F3AP84243 AL034351.1-201ENST00000605288 668 ntBASIC3.47□□□□□ -1.85
H3F3AP84243 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.47□□□□□ -1.85
H3F3AP84243 AL591424.2-201ENST00000617023 128 ntBASIC3.47□□□□□ -1.85
H3F3AP84243 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.47□□□□□ -1.85
H3F3AP84243 AC073530.2-201ENST00000623987 261 ntBASIC3.47□□□□□ -1.85
H3F3AP84243 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.47□□□□□ -1.85
H3F3AP84243 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.47□□□□□ -1.85
H3F3AP84243 ATE1-AS1-202ENST00000636460 506 ntBASIC3.47□□□□□ -1.85
H3F3AP84243 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.47□□□□□ -1.85
H3F3AP84243 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
H3F3AP84243 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
H3F3AP84243 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.47□□□□□ -1.85
H3F3AP84243 AC090229.1-201ENST00000590983 1609 ntBASIC3.47□□□□□ -1.85
H3F3AP84243 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
H3F3AP84243 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
H3F3AP84243 AC233968.1-201ENST00000611212 1300 ntBASIC3.46□□□□□ -1.85
H3F3AP84243 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.46□□□□□ -1.86
H3F3AP84243 AL136964.1-201ENST00000622038 2990 ntBASIC3.46□□□□□ -1.86
H3F3AP84243 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
H3F3AP84243 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
H3F3AP84243 RNA5SP97-201ENST00000365006 84 ntBASIC3.46□□□□□ -1.86
H3F3AP84243 U3.15-201ENST00000365398 212 ntBASIC3.46□□□□□ -1.86
H3F3AP84243 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
H3F3AP84243 U1.1-201ENST00000384101 164 ntBASIC3.46□□□□□ -1.86
H3F3AP84243 MT-TP-201ENST00000387461 68 ntBASIC3.46□□□□□ -1.86
H3F3AP84243 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
H3F3AP84243 ZNF602P-201ENST00000405929 924 ntBASIC3.46□□□□□ -1.86
H3F3AP84243 RN7SKP263-201ENST00000411194 309 ntBASIC3.46□□□□□ -1.86
H3F3AP84243 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.46□□□□□ -1.86
H3F3AP84243 MTCO3P21-201ENST00000430791 643 ntBASIC3.46□□□□□ -1.86
H3F3AP84243 AC087650.1-201ENST00000431445 468 ntBASIC3.46□□□□□ -1.86
H3F3AP84243 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
H3F3AP84243 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.46□□□□□ -1.86
H3F3AP84243 CYCSP53-201ENST00000455540 265 ntBASIC3.46□□□□□ -1.86
H3F3AP84243 OR9M1P-201ENST00000459641 921 ntBASIC3.46□□□□□ -1.86
H3F3AP84243 PPIAP15-201ENST00000479662 484 ntBASIC3.46□□□□□ -1.86
H3F3AP84243 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.46□□□□□ -1.86
H3F3AP84243 AC020593.1-201ENST00000507399 299 ntBASIC3.46□□□□□ -1.86
H3F3AP84243 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
H3F3AP84243 FTH1P9-201ENST00000513251 355 ntBASIC3.46□□□□□ -1.86
H3F3AP84243 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.46□□□□□ -1.86
H3F3AP84243 RNA5SP143-201ENST00000516936 115 ntBASIC3.46□□□□□ -1.86
H3F3AP84243 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms