Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RPL7P53-201ENST00000421245 739 ntBASIC4.22□□□□□ -1.73
TPM4P67936 AC006989.1-201ENST00000427212 131 ntBASIC4.22□□□□□ -1.73
TPM4P67936 RPS29P31-201ENST00000446147 164 ntBASIC4.22□□□□□ -1.73
TPM4P67936 AC110792.1-201ENST00000491826 472 ntBASIC4.22□□□□□ -1.73
TPM4P67936 AC091167.1-201ENST00000492017 396 ntBASIC4.22□□□□□ -1.73
TPM4P67936 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.22□□□□□ -1.73
TPM4P67936 AC008489.1-201ENST00000524271 483 ntBASIC4.22□□□□□ -1.73
TPM4P67936 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.22□□□□□ -1.73
TPM4P67936 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
TPM4P67936 PDCL2P2-201ENST00000533651 189 ntBASIC4.22□□□□□ -1.73
TPM4P67936 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.22□□□□□ -1.73
TPM4P67936 RN7SL753P-201ENST00000581238 290 ntBASIC4.22□□□□□ -1.73
TPM4P67936 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.22□□□□□ -1.73
TPM4P67936 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.22□□□□□ -1.73
TPM4P67936 RMST_8.1-201ENST00000610287 165 ntBASIC4.22□□□□□ -1.73
TPM4P67936 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
TPM4P67936 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TPM4P67936 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.22□□□□□ -1.73
TPM4P67936 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TPM4P67936 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TPM4P67936 EXOC5P1-201ENST00000510543 1969 ntBASIC4.22□□□□□ -1.73
TPM4P67936 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
TPM4P67936 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.21□□□□□ -1.73
TPM4P67936 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TPM4P67936 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.21□□□□□ -1.74
TPM4P67936 AL590704.1-201ENST00000402856 794 ntBASIC4.21□□□□□ -1.74
TPM4P67936 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.21□□□□□ -1.74
TPM4P67936 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.21□□□□□ -1.74
TPM4P67936 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.21□□□□□ -1.74
TPM4P67936 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.21□□□□□ -1.74
TPM4P67936 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.21□□□□□ -1.74
TPM4P67936 TCEA1P2-201ENST00000420496 906 ntBASIC4.21□□□□□ -1.74
TPM4P67936 COX6CP15-201ENST00000426313 211 ntBASIC4.21□□□□□ -1.74
TPM4P67936 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.21□□□□□ -1.74
TPM4P67936 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.21□□□□□ -1.74
TPM4P67936 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.21□□□□□ -1.74
TPM4P67936 NDUFA12P1-201ENST00000455914 406 ntBASIC4.21□□□□□ -1.74
TPM4P67936 AC099563.1-201ENST00000456086 418 ntBASIC4.21□□□□□ -1.74
TPM4P67936 RPS23P7-201ENST00000466210 444 ntBASIC4.21□□□□□ -1.74
TPM4P67936 AC018635.1-201ENST00000468292 1030 ntBASIC4.21□□□□□ -1.74
TPM4P67936 AC022336.1-201ENST00000475510 337 ntBASIC4.21□□□□□ -1.74
TPM4P67936 NPM1P17-201ENST00000479221 602 ntBASIC4.21□□□□□ -1.74
TPM4P67936 RPL23AP73-201ENST00000492507 471 ntBASIC4.21□□□□□ -1.74
TPM4P67936 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.21□□□□□ -1.74
TPM4P67936 AP001960.1-201ENST00000506494 658 ntBASIC4.21□□□□□ -1.74
TPM4P67936 ARL2BPP6-201ENST00000512757 439 ntBASIC4.21□□□□□ -1.74
TPM4P67936 YPEL5P3-201ENST00000547227 352 ntBASIC4.21□□□□□ -1.74
TPM4P67936 AL121766.1-201ENST00000547436 487 ntBASIC4.21□□□□□ -1.74
TPM4P67936 AC006960.3-201ENST00000561845 705 ntBASIC4.21□□□□□ -1.74
TPM4P67936 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.21□□□□□ -1.74
TPM4P67936 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.21□□□□□ -1.74
TPM4P67936 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.21□□□□□ -1.74
TPM4P67936 MIR4425-201ENST00000580572 84 ntBASIC4.21□□□□□ -1.74
TPM4P67936 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.21□□□□□ -1.74
TPM4P67936 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.21□□□□□ -1.74
TPM4P67936 AL049844.2-201ENST00000604280 628 ntBASIC4.21□□□□□ -1.74
TPM4P67936 AC115621.1-201ENST00000604653 858 ntBASIC4.21□□□□□ -1.74
TPM4P67936 AL365503.1-201ENST00000605247 905 ntBASIC4.21□□□□□ -1.74
TPM4P67936 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.21□□□□□ -1.74
TPM4P67936 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TPM4P67936 MIR7153-201ENST00000637758 57 ntBASIC4.21□□□□□ -1.74
TPM4P67936 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TPM4P67936 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.21□□□□□ -1.74
TPM4P67936 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
TPM4P67936 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.21□□□□□ -1.74
TPM4P67936 MAPK10-372ENST00000641954 3413 ntBASIC4.2□□□□□ -1.74
TPM4P67936 Y_RNA.62-201ENST00000362840 99 ntBASIC4.2□□□□□ -1.74
TPM4P67936 MIR192-201ENST00000384915 110 ntBASIC4.2□□□□□ -1.74
TPM4P67936 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TPM4P67936 RPS4XP9-201ENST00000405151 780 ntBASIC4.2□□□□□ -1.74
TPM4P67936 AC016397.1-201ENST00000412463 242 ntBASIC4.2□□□□□ -1.74
TPM4P67936 NPM1P24-201ENST00000428039 894 ntBASIC4.2□□□□□ -1.74
TPM4P67936 HMGB3P5-201ENST00000428894 612 ntBASIC4.2□□□□□ -1.74
TPM4P67936 AC023141.6-201ENST00000429418 337 ntBASIC4.2□□□□□ -1.74
TPM4P67936 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.2□□□□□ -1.74
TPM4P67936 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.2□□□□□ -1.74
TPM4P67936 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.2□□□□□ -1.74
TPM4P67936 TXNP1-201ENST00000441872 371 ntBASIC4.2□□□□□ -1.74
TPM4P67936 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.2□□□□□ -1.74
TPM4P67936 RN7SL610P-201ENST00000463845 291 ntBASIC4.2□□□□□ -1.74
TPM4P67936 AC026784.1-201ENST00000507986 352 ntBASIC4.2□□□□□ -1.74
TPM4P67936 RNA5SP208-201ENST00000516156 78 ntBASIC4.2□□□□□ -1.74
TPM4P67936 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.2□□□□□ -1.74
TPM4P67936 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.2□□□□□ -1.74
TPM4P67936 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
TPM4P67936 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.2□□□□□ -1.74
TPM4P67936 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.2□□□□□ -1.74
TPM4P67936 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.2□□□□□ -1.74
TPM4P67936 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TPM4P67936 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.2□□□□□ -1.74
TPM4P67936 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.2□□□□□ -1.74
TPM4P67936 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.2□□□□□ -1.74
TPM4P67936 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.2□□□□□ -1.74
TPM4P67936 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.2□□□□□ -1.74
TPM4P67936 AC123768.4-201ENST00000616244 701 ntBASIC4.2□□□□□ -1.74
TPM4P67936 AC016957.2-201ENST00000616998 848 ntBASIC4.2□□□□□ -1.74
TPM4P67936 MIR7703-201ENST00000620784 77 ntBASIC4.2□□□□□ -1.74
TPM4P67936 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.2□□□□□ -1.74
TPM4P67936 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TPM4P67936 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms