Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 CDH12P2-201ENST00000504393 298 ntBASIC3.81□□□□□ -1.8
VSX2P58304 AC034244.2-201ENST00000514668 858 ntBASIC3.81□□□□□ -1.8
VSX2P58304 RNA5SP179-201ENST00000517284 121 ntBASIC3.81□□□□□ -1.8
VSX2P58304 IGKV2-38-201ENST00000517443 247 ntBASIC3.81□□□□□ -1.8
VSX2P58304 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.81□□□□□ -1.8
VSX2P58304 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VSX2P58304 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.81□□□□□ -1.8
VSX2P58304 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.81□□□□□ -1.8
VSX2P58304 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.81□□□□□ -1.8
VSX2P58304 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VSX2P58304 RFPL1S-203ENST00000539579 330 ntBASIC3.81□□□□□ -1.8
VSX2P58304 AC007599.1-201ENST00000568688 1174 ntBASIC3.81□□□□□ -1.8
VSX2P58304 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.81□□□□□ -1.8
VSX2P58304 AC020914.4-201ENST00000597690 277 ntBASIC3.81□□□□□ -1.8
VSX2P58304 MTCO2P22-201ENST00000603246 681 ntBASIC3.81□□□□□ -1.8
VSX2P58304 AC091167.4-201ENST00000605079 184 ntBASIC3.81□□□□□ -1.8
VSX2P58304 AL592436.1-201ENST00000605135 558 ntBASIC3.81□□□□□ -1.8
VSX2P58304 AC099676.1-201ENST00000608886 657 ntBASIC3.81□□□□□ -1.8
VSX2P58304 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.81□□□□□ -1.8
VSX2P58304 AC019080.5-201ENST00000624891 757 ntBASIC3.81□□□□□ -1.8
VSX2P58304 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
VSX2P58304 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VSX2P58304 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VSX2P58304 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VSX2P58304 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VSX2P58304 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VSX2P58304 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
VSX2P58304 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VSX2P58304 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VSX2P58304 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
VSX2P58304 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
VSX2P58304 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.8□□□□□ -1.8
VSX2P58304 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
VSX2P58304 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.8□□□□□ -1.8
VSX2P58304 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VSX2P58304 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VSX2P58304 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VSX2P58304 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VSX2P58304 AL445189.1-201ENST00000405722 338 ntBASIC3.8□□□□□ -1.8
VSX2P58304 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.8□□□□□ -1.8
VSX2P58304 HIGD1AP4-201ENST00000430194 280 ntBASIC3.8□□□□□ -1.8
VSX2P58304 RPS29P7-201ENST00000439662 171 ntBASIC3.8□□□□□ -1.8
VSX2P58304 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.8□□□□□ -1.8
VSX2P58304 VN1R48P-201ENST00000448149 1036 ntBASIC3.8□□□□□ -1.8
VSX2P58304 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.8□□□□□ -1.8
VSX2P58304 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.8□□□□□ -1.8
VSX2P58304 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.8□□□□□ -1.8
VSX2P58304 PPIAP15-201ENST00000479662 484 ntBASIC3.8□□□□□ -1.8
VSX2P58304 AC025554.1-201ENST00000505641 188 ntBASIC3.8□□□□□ -1.8
VSX2P58304 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.8□□□□□ -1.8
VSX2P58304 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.8□□□□□ -1.8
VSX2P58304 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
VSX2P58304 AC022968.1-201ENST00000567372 442 ntBASIC3.8□□□□□ -1.8
VSX2P58304 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.8□□□□□ -1.8
VSX2P58304 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.8□□□□□ -1.8
VSX2P58304 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.8□□□□□ -1.8
VSX2P58304 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.8□□□□□ -1.8
VSX2P58304 AC022916.3-201ENST00000592961 742 ntBASIC3.8□□□□□ -1.8
VSX2P58304 AC005255.1-201ENST00000593748 216 ntBASIC3.8□□□□□ -1.8
VSX2P58304 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.8□□□□□ -1.8
VSX2P58304 AC084373.1-201ENST00000603311 235 ntBASIC3.8□□□□□ -1.8
VSX2P58304 AC010200.2-201ENST00000605098 235 ntBASIC3.8□□□□□ -1.8
VSX2P58304 AC073111.2-201ENST00000605657 1075 ntBASIC3.8□□□□□ -1.8
VSX2P58304 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VSX2P58304 AL161637.1-201ENST00000622380 412 ntBASIC3.8□□□□□ -1.8
VSX2P58304 RPL23AP61-201ENST00000623642 466 ntBASIC3.8□□□□□ -1.8
VSX2P58304 AL773545.4-201ENST00000637262 310 ntBASIC3.8□□□□□ -1.8
VSX2P58304 AL513478.4-201ENST00000641636 310 ntBASIC3.8□□□□□ -1.8
VSX2P58304 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VSX2P58304 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.8□□□□□ -1.8
VSX2P58304 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
VSX2P58304 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VSX2P58304 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VSX2P58304 AP002001.2-201ENST00000529025 1469 ntBASIC3.79□□□□□ -1.8
VSX2P58304 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VSX2P58304 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VSX2P58304 AC007529.1-201ENST00000418574 2178 ntBASIC3.79□□□□□ -1.8
VSX2P58304 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.79□□□□□ -1.8
VSX2P58304 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
VSX2P58304 AC114546.3-201ENST00000623582 1734 ntBASIC3.79□□□□□ -1.8
VSX2P58304 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VSX2P58304 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VSX2P58304 RNA5SP399-201ENST00000364003 117 ntBASIC3.79□□□□□ -1.8
VSX2P58304 RN7SKP280-201ENST00000364196 304 ntBASIC3.79□□□□□ -1.8
VSX2P58304 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VSX2P58304 AC025750.1-201ENST00000399891 379 ntBASIC3.79□□□□□ -1.8
VSX2P58304 RNA5SP239-201ENST00000410218 129 ntBASIC3.79□□□□□ -1.8
VSX2P58304 RN7SKP222-201ENST00000410651 315 ntBASIC3.79□□□□□ -1.8
VSX2P58304 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.79□□□□□ -1.8
VSX2P58304 RPL7AP73-201ENST00000413490 353 ntBASIC3.79□□□□□ -1.8
VSX2P58304 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.79□□□□□ -1.8
VSX2P58304 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VSX2P58304 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.79□□□□□ -1.8
VSX2P58304 VN1R25P-201ENST00000443385 738 ntBASIC3.79□□□□□ -1.8
VSX2P58304 AL353898.1-201ENST00000444055 238 ntBASIC3.79□□□□□ -1.8
VSX2P58304 AL359073.1-201ENST00000448036 403 ntBASIC3.79□□□□□ -1.8
VSX2P58304 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.79□□□□□ -1.8
VSX2P58304 VN1R40P-201ENST00000455196 941 ntBASIC3.79□□□□□ -1.8
VSX2P58304 RN7SL271P-201ENST00000487601 295 ntBASIC3.79□□□□□ -1.8
VSX2P58304 OR52A4P-203ENST00000498233 1014 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms