Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AL136370.1-201ENST00000608166 691 ntBASIC4.38□□□□□ -1.71
PEX3P56589 AP000255.1-201ENST00000610276 676 ntBASIC4.38□□□□□ -1.71
PEX3P56589 AC024941.1-201ENST00000612250 334 ntBASIC4.38□□□□□ -1.71
PEX3P56589 AC020978.9-201ENST00000624380 1141 ntBASIC4.38□□□□□ -1.71
PEX3P56589 AP002371.2-201ENST00000624450 503 ntBASIC4.38□□□□□ -1.71
PEX3P56589 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.38□□□□□ -1.71
PEX3P56589 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PEX3P56589 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PEX3P56589 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
PEX3P56589 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PEX3P56589 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PEX3P56589 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
PEX3P56589 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PEX3P56589 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.37□□□□□ -1.71
PEX3P56589 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PEX3P56589 SNORA57.1-201ENST00000391227 145 ntBASIC4.37□□□□□ -1.71
PEX3P56589 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PEX3P56589 AC104297.1-201ENST00000393779 870 ntBASIC4.37□□□□□ -1.71
PEX3P56589 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.37□□□□□ -1.71
PEX3P56589 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.37□□□□□ -1.71
PEX3P56589 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.37□□□□□ -1.71
PEX3P56589 SNORA26.10-201ENST00000516427 141 ntBASIC4.37□□□□□ -1.71
PEX3P56589 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.37□□□□□ -1.71
PEX3P56589 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.37□□□□□ -1.71
PEX3P56589 AC109635.6-201ENST00000525487 1113 ntBASIC4.37□□□□□ -1.71
PEX3P56589 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.37□□□□□ -1.71
PEX3P56589 OR4R2P-201ENST00000530815 597 ntBASIC4.37□□□□□ -1.71
PEX3P56589 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.37□□□□□ -1.71
PEX3P56589 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.37□□□□□ -1.71
PEX3P56589 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.37□□□□□ -1.71
PEX3P56589 MIR4286-201ENST00000580651 93 ntBASIC4.37□□□□□ -1.71
PEX3P56589 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.37□□□□□ -1.71
PEX3P56589 AC012557.1-201ENST00000607115 611 ntBASIC4.37□□□□□ -1.71
PEX3P56589 AL135786.2-201ENST00000608422 615 ntBASIC4.37□□□□□ -1.71
PEX3P56589 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.37□□□□□ -1.71
PEX3P56589 AL645927.2-201ENST00000618350 349 ntBASIC4.37□□□□□ -1.71
PEX3P56589 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.37□□□□□ -1.71
PEX3P56589 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.37□□□□□ -1.71
PEX3P56589 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PEX3P56589 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PEX3P56589 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PEX3P56589 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PEX3P56589 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PEX3P56589 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PEX3P56589 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.37□□□□□ -1.71
PEX3P56589 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.36□□□□□ -1.71
PEX3P56589 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.36□□□□□ -1.71
PEX3P56589 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.36□□□□□ -1.71
PEX3P56589 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PEX3P56589 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.36□□□□□ -1.71
PEX3P56589 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PEX3P56589 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PEX3P56589 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PEX3P56589 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PEX3P56589 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PEX3P56589 RHOT1P2-201ENST00000366423 333 ntBASIC4.36□□□□□ -1.71
PEX3P56589 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.36□□□□□ -1.71
PEX3P56589 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PEX3P56589 RPL7AP73-201ENST00000413490 353 ntBASIC4.36□□□□□ -1.71
PEX3P56589 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.36□□□□□ -1.71
PEX3P56589 AC004552.1-201ENST00000419089 348 ntBASIC4.36□□□□□ -1.71
PEX3P56589 AC092017.2-201ENST00000427600 362 ntBASIC4.36□□□□□ -1.71
PEX3P56589 NDUFA5P10-201ENST00000432147 357 ntBASIC4.36□□□□□ -1.71
PEX3P56589 ELOCP18-201ENST00000434209 337 ntBASIC4.36□□□□□ -1.71
PEX3P56589 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.36□□□□□ -1.71
PEX3P56589 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.36□□□□□ -1.71
PEX3P56589 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.36□□□□□ -1.71
PEX3P56589 HSPE1P22-201ENST00000456856 327 ntBASIC4.36□□□□□ -1.71
PEX3P56589 RPS26P3-201ENST00000470205 348 ntBASIC4.36□□□□□ -1.71
PEX3P56589 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.36□□□□□ -1.71
PEX3P56589 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PEX3P56589 PPIAP15-201ENST00000479662 484 ntBASIC4.36□□□□□ -1.71
PEX3P56589 AC090543.2-201ENST00000483963 348 ntBASIC4.36□□□□□ -1.71
PEX3P56589 AC004057.1-201ENST00000485827 348 ntBASIC4.36□□□□□ -1.71
PEX3P56589 VN1R105P-201ENST00000486595 910 ntBASIC4.36□□□□□ -1.71
PEX3P56589 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.36□□□□□ -1.71
PEX3P56589 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.36□□□□□ -1.71
PEX3P56589 RNU6-1102P-201ENST00000516149 96 ntBASIC4.36□□□□□ -1.71
PEX3P56589 SNORA76.2-201ENST00000517095 137 ntBASIC4.36□□□□□ -1.71
PEX3P56589 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.36□□□□□ -1.71
PEX3P56589 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.36□□□□□ -1.71
PEX3P56589 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.36□□□□□ -1.71
PEX3P56589 AC018442.3-201ENST00000523025 183 ntBASIC4.36□□□□□ -1.71
PEX3P56589 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.36□□□□□ -1.71
PEX3P56589 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.36□□□□□ -1.71
PEX3P56589 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.36□□□□□ -1.71
PEX3P56589 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.36□□□□□ -1.71
PEX3P56589 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.36□□□□□ -1.71
PEX3P56589 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.36□□□□□ -1.71
PEX3P56589 CR383656.14-201ENST00000551951 406 ntBASIC4.36□□□□□ -1.71
PEX3P56589 GNRHR2P1-201ENST00000555315 631 ntBASIC4.36□□□□□ -1.71
PEX3P56589 AC053481.4-201ENST00000583164 216 ntBASIC4.36□□□□□ -1.71
PEX3P56589 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.36□□□□□ -1.71
PEX3P56589 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.36□□□□□ -1.71
PEX3P56589 AC005014.3-201ENST00000605985 190 ntBASIC4.36□□□□□ -1.71
PEX3P56589 AL158211.2-201ENST00000607282 395 ntBASIC4.36□□□□□ -1.71
PEX3P56589 AL133445.2-201ENST00000611191 527 ntBASIC4.36□□□□□ -1.71
PEX3P56589 AC253576.2-201ENST00000618815 580 ntBASIC4.36□□□□□ -1.71
PEX3P56589 AL445493.3-201ENST00000619568 477 ntBASIC4.36□□□□□ -1.71
PEX3P56589 AC097460.3-201ENST00000623099 442 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms