Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RPS6P12-201ENST00000432491 726 ntBASIC4.53□□□□□ -1.68
VCPP55072 HLA-N-201ENST00000437516 135 ntBASIC4.53□□□□□ -1.68
VCPP55072 RPL7P33-201ENST00000444159 742 ntBASIC4.53□□□□□ -1.68
VCPP55072 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.53□□□□□ -1.68
VCPP55072 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.53□□□□□ -1.68
VCPP55072 RNU7-27P-201ENST00000459281 62 ntBASIC4.53□□□□□ -1.68
VCPP55072 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.53□□□□□ -1.68
VCPP55072 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.53□□□□□ -1.68
VCPP55072 AC011037.1-201ENST00000483964 558 ntBASIC4.53□□□□□ -1.68
VCPP55072 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.53□□□□□ -1.68
VCPP55072 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.53□□□□□ -1.68
VCPP55072 AC110768.1-201ENST00000509222 400 ntBASIC4.53□□□□□ -1.68
VCPP55072 ATP1B1P1-201ENST00000509767 915 ntBASIC4.53□□□□□ -1.68
VCPP55072 FTH1P21-201ENST00000512179 511 ntBASIC4.53□□□□□ -1.68
VCPP55072 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.53□□□□□ -1.68
VCPP55072 PHBP17-201ENST00000528576 541 ntBASIC4.53□□□□□ -1.68
VCPP55072 AC105233.3-201ENST00000531125 744 ntBASIC4.53□□□□□ -1.68
VCPP55072 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.53□□□□□ -1.68
VCPP55072 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VCPP55072 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.53□□□□□ -1.68
VCPP55072 CYP4A43P-201ENST00000568156 121 ntBASIC4.53□□□□□ -1.68
VCPP55072 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.53□□□□□ -1.68
VCPP55072 AL354984.3-201ENST00000604803 325 ntBASIC4.53□□□□□ -1.68
VCPP55072 OR6R2P-201ENST00000609216 300 ntBASIC4.53□□□□□ -1.68
VCPP55072 AL031666.3-201ENST00000609320 1006 ntBASIC4.53□□□□□ -1.68
VCPP55072 AC096577.2-201ENST00000611455 153 ntBASIC4.53□□□□□ -1.68
VCPP55072 AC084757.4-201ENST00000616350 526 ntBASIC4.53□□□□□ -1.68
VCPP55072 uc_338.13-201ENST00000618243 179 ntBASIC4.53□□□□□ -1.68
VCPP55072 AC074276.2-201ENST00000619891 348 ntBASIC4.53□□□□□ -1.68
VCPP55072 AC019278.1-201ENST00000623516 479 ntBASIC4.53□□□□□ -1.68
VCPP55072 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VCPP55072 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VCPP55072 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
VCPP55072 NOL8P1-201ENST00000508336 3529 ntBASIC4.53□□□□□ -1.68
VCPP55072 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VCPP55072 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VCPP55072 AC092162.3-201ENST00000624511 1624 ntBASIC4.53□□□□□ -1.68
VCPP55072 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
VCPP55072 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VCPP55072 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VCPP55072 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.52□□□□□ -1.69
VCPP55072 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
VCPP55072 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VCPP55072 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.52□□□□□ -1.69
VCPP55072 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VCPP55072 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
VCPP55072 RNA5SP52-201ENST00000362448 134 ntBASIC4.52□□□□□ -1.69
VCPP55072 RNA5SP119-201ENST00000362715 117 ntBASIC4.52□□□□□ -1.69
VCPP55072 SNORA27.3-201ENST00000364937 134 ntBASIC4.52□□□□□ -1.69
VCPP55072 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VCPP55072 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
VCPP55072 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VCPP55072 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.52□□□□□ -1.69
VCPP55072 MFSD13B-201ENST00000420133 1290 ntBASIC4.52□□□□□ -1.69
VCPP55072 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.52□□□□□ -1.69
VCPP55072 AL353898.1-201ENST00000444055 238 ntBASIC4.52□□□□□ -1.69
VCPP55072 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.52□□□□□ -1.69
VCPP55072 RPL7P31-201ENST00000450192 724 ntBASIC4.52□□□□□ -1.69
VCPP55072 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.52□□□□□ -1.69
VCPP55072 ACTR6P1-201ENST00000514311 1104 ntBASIC4.52□□□□□ -1.69
VCPP55072 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.52□□□□□ -1.69
VCPP55072 SNORA70.24-201ENST00000517233 118 ntBASIC4.52□□□□□ -1.69
VCPP55072 HIGD1AP18-201ENST00000520730 278 ntBASIC4.52□□□□□ -1.69
VCPP55072 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.52□□□□□ -1.69
VCPP55072 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.52□□□□□ -1.69
VCPP55072 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.52□□□□□ -1.69
VCPP55072 AC069240.1-201ENST00000548774 375 ntBASIC4.52□□□□□ -1.69
VCPP55072 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.52□□□□□ -1.69
VCPP55072 AC006116.5-201ENST00000591936 559 ntBASIC4.52□□□□□ -1.69
VCPP55072 MIMT1-201ENST00000597105 1050 ntBASIC4.52□□□□□ -1.69
VCPP55072 AC079587.1-201ENST00000603846 277 ntBASIC4.52□□□□□ -1.69
VCPP55072 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.52□□□□□ -1.69
VCPP55072 SNORA51-201ENST00000606420 132 ntBASIC4.52□□□□□ -1.69
VCPP55072 RNU4-89P-201ENST00000607443 133 ntBASIC4.52□□□□□ -1.69
VCPP55072 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.52□□□□□ -1.69
VCPP55072 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.52□□□□□ -1.69
VCPP55072 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.52□□□□□ -1.69
VCPP55072 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
VCPP55072 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
VCPP55072 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VCPP55072 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
VCPP55072 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VCPP55072 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.52□□□□□ -1.69
VCPP55072 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VCPP55072 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VCPP55072 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
VCPP55072 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VCPP55072 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.51□□□□□ -1.69
VCPP55072 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VCPP55072 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
VCPP55072 RNU6-666P-201ENST00000363499 107 ntBASIC4.51□□□□□ -1.69
VCPP55072 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
VCPP55072 RPL31P52-201ENST00000407532 367 ntBASIC4.51□□□□□ -1.69
VCPP55072 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.51□□□□□ -1.69
VCPP55072 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.51□□□□□ -1.69
VCPP55072 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.51□□□□□ -1.69
VCPP55072 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.51□□□□□ -1.69
VCPP55072 CR848007.2-201ENST00000424918 787 ntBASIC4.51□□□□□ -1.69
VCPP55072 OR8F1P-201ENST00000425243 930 ntBASIC4.51□□□□□ -1.69
VCPP55072 MRPL50P1-201ENST00000431951 384 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms