Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.07□□□□□ -1.76
SOX3P41225 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.07□□□□□ -1.76
SOX3P41225 AC068135.1-201ENST00000446164 246 ntBASIC4.07□□□□□ -1.76
SOX3P41225 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.07□□□□□ -1.76
SOX3P41225 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SOX3P41225 AC109327.1-201ENST00000471666 403 ntBASIC4.07□□□□□ -1.76
SOX3P41225 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.07□□□□□ -1.76
SOX3P41225 AC010627.1-201ENST00000503819 1294 ntBASIC4.07□□□□□ -1.76
SOX3P41225 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.07□□□□□ -1.76
SOX3P41225 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.07□□□□□ -1.76
SOX3P41225 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.07□□□□□ -1.76
SOX3P41225 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.07□□□□□ -1.76
SOX3P41225 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.07□□□□□ -1.76
SOX3P41225 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.07□□□□□ -1.76
SOX3P41225 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.07□□□□□ -1.76
SOX3P41225 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SOX3P41225 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.07□□□□□ -1.76
SOX3P41225 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.07□□□□□ -1.76
SOX3P41225 CYP4A43P-201ENST00000568156 121 ntBASIC4.07□□□□□ -1.76
SOX3P41225 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.07□□□□□ -1.76
SOX3P41225 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SOX3P41225 KPNA2P3-201ENST00000584190 848 ntBASIC4.07□□□□□ -1.76
SOX3P41225 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SOX3P41225 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.07□□□□□ -1.76
SOX3P41225 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.07□□□□□ -1.76
SOX3P41225 VN1R87P-201ENST00000596706 487 ntBASIC4.07□□□□□ -1.76
SOX3P41225 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.07□□□□□ -1.76
SOX3P41225 AL139395.1-201ENST00000603662 160 ntBASIC4.07□□□□□ -1.76
SOX3P41225 AC023813.4-201ENST00000607580 580 ntBASIC4.07□□□□□ -1.76
SOX3P41225 AL355816.2-201ENST00000610049 647 ntBASIC4.07□□□□□ -1.76
SOX3P41225 AL158196.1-201ENST00000616786 434 ntBASIC4.07□□□□□ -1.76
SOX3P41225 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.07□□□□□ -1.76
SOX3P41225 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SOX3P41225 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SOX3P41225 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.07□□□□□ -1.76
SOX3P41225 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SOX3P41225 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SOX3P41225 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.07□□□□□ -1.76
SOX3P41225 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SOX3P41225 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX3P41225 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.06□□□□□ -1.76
SOX3P41225 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX3P41225 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX3P41225 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
SOX3P41225 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
SOX3P41225 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SOX3P41225 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX3P41225 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SOX3P41225 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX3P41225 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SOX3P41225 RNU1-15P-201ENST00000353977 144 ntBASIC4.06□□□□□ -1.76
SOX3P41225 RNU6-236P-201ENST00000363886 106 ntBASIC4.06□□□□□ -1.76
SOX3P41225 MIR3065-201ENST00000390137 79 ntBASIC4.06□□□□□ -1.76
SOX3P41225 AL049693.1-201ENST00000402760 611 ntBASIC4.06□□□□□ -1.76
SOX3P41225 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.06□□□□□ -1.76
SOX3P41225 RNA5SP104-201ENST00000410989 118 ntBASIC4.06□□□□□ -1.76
SOX3P41225 AC092638.1-201ENST00000411966 1275 ntBASIC4.06□□□□□ -1.76
SOX3P41225 AC011933.1-201ENST00000413334 321 ntBASIC4.06□□□□□ -1.76
SOX3P41225 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.06□□□□□ -1.76
SOX3P41225 AL139095.3-201ENST00000419672 1203 ntBASIC4.06□□□□□ -1.76
SOX3P41225 USP9YP21-201ENST00000420603 432 ntBASIC4.06□□□□□ -1.76
SOX3P41225 GAPDHP49-201ENST00000421421 961 ntBASIC4.06□□□□□ -1.76
SOX3P41225 MTCO2P23-201ENST00000425216 680 ntBASIC4.06□□□□□ -1.76
SOX3P41225 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.06□□□□□ -1.76
SOX3P41225 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.06□□□□□ -1.76
SOX3P41225 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX3P41225 CDY14P-201ENST00000431260 1014 ntBASIC4.06□□□□□ -1.76
SOX3P41225 MTND6P18-201ENST00000439477 513 ntBASIC4.06□□□□□ -1.76
SOX3P41225 UBE2V1P3-201ENST00000439651 417 ntBASIC4.06□□□□□ -1.76
SOX3P41225 CDY12P-201ENST00000440679 1015 ntBASIC4.06□□□□□ -1.76
SOX3P41225 RRM2P4-201ENST00000441721 562 ntBASIC4.06□□□□□ -1.76
SOX3P41225 CDY13P-201ENST00000445813 1015 ntBASIC4.06□□□□□ -1.76
SOX3P41225 AL050341.1-201ENST00000447743 313 ntBASIC4.06□□□□□ -1.76
SOX3P41225 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.06□□□□□ -1.76
SOX3P41225 CDY23P-201ENST00000451661 1014 ntBASIC4.06□□□□□ -1.76
SOX3P41225 RPL10P17-201ENST00000453852 316 ntBASIC4.06□□□□□ -1.76
SOX3P41225 AC005229.2-201ENST00000456995 399 ntBASIC4.06□□□□□ -1.76
SOX3P41225 AC116533.1-201ENST00000459748 321 ntBASIC4.06□□□□□ -1.76
SOX3P41225 AC079804.1-201ENST00000461922 436 ntBASIC4.06□□□□□ -1.76
SOX3P41225 RN7SL385P-201ENST00000468873 276 ntBASIC4.06□□□□□ -1.76
SOX3P41225 RN7SL303P-201ENST00000469773 251 ntBASIC4.06□□□□□ -1.76
SOX3P41225 AC108729.1-201ENST00000487812 947 ntBASIC4.06□□□□□ -1.76
SOX3P41225 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.06□□□□□ -1.76
SOX3P41225 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.06□□□□□ -1.76
SOX3P41225 AC113430.1-201ENST00000506872 718 ntBASIC4.06□□□□□ -1.76
SOX3P41225 AC008565.1-201ENST00000509046 885 ntBASIC4.06□□□□□ -1.76
SOX3P41225 AC010460.2-201ENST00000509054 677 ntBASIC4.06□□□□□ -1.76
SOX3P41225 SNORA19.3-201ENST00000516165 130 ntBASIC4.06□□□□□ -1.76
SOX3P41225 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.06□□□□□ -1.76
SOX3P41225 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.06□□□□□ -1.76
SOX3P41225 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.06□□□□□ -1.76
SOX3P41225 AP001372.4-201ENST00000524889 472 ntBASIC4.06□□□□□ -1.76
SOX3P41225 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SOX3P41225 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.06□□□□□ -1.76
SOX3P41225 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.06□□□□□ -1.76
SOX3P41225 ZNF971P-201ENST00000562068 1249 ntBASIC4.06□□□□□ -1.76
SOX3P41225 AC023575.1-201ENST00000580510 358 ntBASIC4.06□□□□□ -1.76
SOX3P41225 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.06□□□□□ -1.76
SOX3P41225 MIR4697-201ENST00000582977 78 ntBASIC4.06□□□□□ -1.76
SOX3P41225 RPAP2P1-201ENST00000603626 1168 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms