Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 OR11H4-201ENST00000315409 1082 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DMBP28068 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DMBP28068 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DMBP28068 MIR92A2-201ENST00000385299 75 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 RNA5SP317-201ENST00000410176 116 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 RNA5SP311-201ENST00000411290 116 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC048351.1-201ENST00000420064 602 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 COX6CP15-201ENST00000426313 211 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC017083.1-201ENST00000428093 483 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC096638.2-201ENST00000434965 711 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 YWHAQP9-201ENST00000445891 512 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 CCRL1P1-201ENST00000449542 1053 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 RPS11P1-201ENST00000451072 473 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC005229.2-201ENST00000456995 399 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 RPS27AP13-201ENST00000498403 237 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DMBP28068 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 RNA5SP315-201ENST00000516340 116 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 RNA5SP312-201ENST00000517068 116 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC084824.1-201ENST00000550917 1005 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 BNIP3P5-201ENST00000562290 498 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC067959.1-201ENST00000604334 379 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 AP003392.5-201ENST00000607857 415 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC024941.1-201ENST00000612250 334 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 RMST_5.1-201ENST00000618704 126 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC124312.6-202ENST00000623624 418 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC009452.1-201ENST00000640823 606 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 OR5AC4P-202ENST00000642086 985 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DMBP28068 AC006504.1-201ENST00000562493 3666 ntBASIC3.02□□□□□ -1.93
HLA-DMBP28068 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DMBP28068 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DMBP28068 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DMBP28068 BDP1P-201ENST00000582658 1990 ntBASIC3.01□□□□□ -1.93
HLA-DMBP28068 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DMBP28068 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DMBP28068 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DMBP28068 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DMBP28068 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DMBP28068 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DMBP28068 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DMBP28068 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.01□□□□□ -1.93
HLA-DMBP28068 RNA5SP515-201ENST00000364570 118 ntBASIC3.01□□□□□ -1.93
HLA-DMBP28068 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DMBP28068 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DMBP28068 MIR1251-201ENST00000408552 70 ntBASIC3.01□□□□□ -1.93
HLA-DMBP28068 RN7SKP222-201ENST00000410651 315 ntBASIC3.01□□□□□ -1.93
HLA-DMBP28068 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DMBP28068 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DMBP28068 MRPL50P1-201ENST00000431951 384 ntBASIC3.01□□□□□ -1.93
HLA-DMBP28068 KCTD9P3-201ENST00000434597 1169 ntBASIC3.01□□□□□ -1.93
HLA-DMBP28068 OR4C10P-201ENST00000434991 931 ntBASIC3.01□□□□□ -1.93
HLA-DMBP28068 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DMBP28068 TBCAP1-201ENST00000436520 327 ntBASIC3.01□□□□□ -1.93
HLA-DMBP28068 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DMBP28068 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DMBP28068 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
HLA-DMBP28068 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DMBP28068 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DMBP28068 RPL38P1-201ENST00000460914 211 ntBASIC3.01□□□□□ -1.93
HLA-DMBP28068 AC092691.2-201ENST00000461787 803 ntBASIC3.01□□□□□ -1.93
HLA-DMBP28068 SEPT7P6-201ENST00000469999 1143 ntBASIC3.01□□□□□ -1.93
HLA-DMBP28068 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HLA-DMBP28068 RPL7P24-201ENST00000493052 752 ntBASIC3.01□□□□□ -1.93
HLA-DMBP28068 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DMBP28068 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.01□□□□□ -1.93
HLA-DMBP28068 AC026402.1-201ENST00000513642 170 ntBASIC3.01□□□□□ -1.93
HLA-DMBP28068 AC010342.1-201ENST00000514047 877 ntBASIC3.01□□□□□ -1.93
HLA-DMBP28068 RNU6-319P-201ENST00000516025 108 ntBASIC3.01□□□□□ -1.93
HLA-DMBP28068 RNA5SP143-201ENST00000516936 115 ntBASIC3.01□□□□□ -1.93
HLA-DMBP28068 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DMBP28068 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DMBP28068 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms