Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC233702.1-201ENST00000482905 502 ntBASIC6.29□□□□□ -1.4
NFKB1P19838 EIF4EP3-201ENST00000498782 656 ntBASIC6.29□□□□□ -1.4
NFKB1P19838 AC024587.1-201ENST00000505925 2157 ntBASIC6.29□□□□□ -1.4
NFKB1P19838 AC017037.1-201ENST00000508460 471 ntBASIC6.29□□□□□ -1.4
NFKB1P19838 NPM1P41-201ENST00000512920 831 ntBASIC6.29□□□□□ -1.4
NFKB1P19838 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NFKB1P19838 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.29□□□□□ -1.4
NFKB1P19838 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NFKB1P19838 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC6.29□□□□□ -1.4
NFKB1P19838 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC6.29□□□□□ -1.4
NFKB1P19838 DNAJC8P1-201ENST00000554535 372 ntBASIC6.29□□□□□ -1.4
NFKB1P19838 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.29□□□□□ -1.4
NFKB1P19838 AC090651.1-201ENST00000567865 634 ntBASIC6.29□□□□□ -1.4
NFKB1P19838 AC006270.2-201ENST00000578523 652 ntBASIC6.29□□□□□ -1.4
NFKB1P19838 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC6.29□□□□□ -1.4
NFKB1P19838 RNU6-84P-201ENST00000607737 102 ntBASIC6.29□□□□□ -1.4
NFKB1P19838 MIR6813-201ENST00000621638 56 ntBASIC6.29□□□□□ -1.4
NFKB1P19838 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.29□□□□□ -1.4
NFKB1P19838 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.29□□□□□ -1.4
NFKB1P19838 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
NFKB1P19838 AL731532.1-201ENST00000623972 4236 ntBASIC6.29□□□□□ -1.4
NFKB1P19838 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NFKB1P19838 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.29□□□□□ -1.4
NFKB1P19838 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.29□□□□□ -1.4
NFKB1P19838 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
NFKB1P19838 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NFKB1P19838 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
NFKB1P19838 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NFKB1P19838 AC024651.2-201ENST00000562480 2098 ntBASIC6.29□□□□□ -1.4
NFKB1P19838 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NFKB1P19838 AKAP17BP-201ENST00000431706 2719 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NFKB1P19838 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
NFKB1P19838 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
NFKB1P19838 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
NFKB1P19838 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NFKB1P19838 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.28□□□□□ -1.4
NFKB1P19838 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NFKB1P19838 RNU6-639P-201ENST00000384074 107 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 RNU6-196P-201ENST00000384315 107 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 MIR191-201ENST00000384873 92 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 RN7SKP151-201ENST00000410230 316 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC6.28□□□□□ -1.4
NFKB1P19838 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.28□□□□□ -1.4
NFKB1P19838 NDUFB4P5-201ENST00000415445 361 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 AL807761.1-201ENST00000417622 171 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NFKB1P19838 AC019097.1-201ENST00000424783 735 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.28□□□□□ -1.4
NFKB1P19838 AC013403.1-201ENST00000436954 263 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 AL645936.1-201ENST00000441979 518 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 AC097359.1-201ENST00000447946 463 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 PRPF38AP1-201ENST00000451976 933 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.28□□□□□ -1.4
NFKB1P19838 MTND5P22-201ENST00000458380 195 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 AC027575.1-201ENST00000481064 460 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 RPL29P23-201ENST00000486188 442 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.28□□□□□ -1.4
NFKB1P19838 ZNF519P4-201ENST00000514008 125 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.28□□□□□ -1.4
NFKB1P19838 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC6.28□□□□□ -1.4
NFKB1P19838 COX6CP8-201ENST00000522620 226 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 SUB1P1-201ENST00000524415 382 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.28□□□□□ -1.4
NFKB1P19838 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC6.28□□□□□ -1.4
NFKB1P19838 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.28□□□□□ -1.4
NFKB1P19838 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.28□□□□□ -1.4
NFKB1P19838 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.28□□□□□ -1.4
NFKB1P19838 VN1R107P-201ENST00000601784 209 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.28□□□□□ -1.4
NFKB1P19838 AC087763.1-201ENST00000603391 286 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 BX323046.1-201ENST00000610145 535 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 AC015908.5-201ENST00000623289 343 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 AC040168.1-201ENST00000623594 991 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 AC010325.3-201ENST00000641084 394 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 AC090220.1-201ENST00000593078 1699 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NFKB1P19838 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
NFKB1P19838 MAPK10-261ENST00000641050 3109 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NFKB1P19838 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NFKB1P19838 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.28□□□□□ -1.4
NFKB1P19838 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NFKB1P19838 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
NFKB1P19838 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.28□□□□□ -1.4
NFKB1P19838 AC068769.1-201ENST00000474767 2426 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.28□□□□□ -1.4
NFKB1P19838 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NFKB1P19838 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
NFKB1P19838 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6.28□□□□□ -1.4
NFKB1P19838 AC005725.1-201ENST00000577346 2607 ntBASIC6.28□□□□□ -1.4
NFKB1P19838 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.28□□□□□ -1.4
NFKB1P19838 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
NFKB1P19838 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.27□□□□□ -1.41
NFKB1P19838 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
NFKB1P19838 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
NFKB1P19838 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
NFKB1P19838 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms