Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC007656.2-201ENST00000624902 4547 ntBASIC3.73□□□□□ -1.81
HMGA1P17096 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HMGA1P17096 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HMGA1P17096 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGA1P17096 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.73□□□□□ -1.81
HMGA1P17096 RNA5SP50-201ENST00000363731 107 ntBASIC3.73□□□□□ -1.81
HMGA1P17096 SNORA9-201ENST00000384215 133 ntBASIC3.73□□□□□ -1.81
HMGA1P17096 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HMGA1P17096 AC017079.2-201ENST00000416102 485 ntBASIC3.73□□□□□ -1.81
HMGA1P17096 AC017078.1-201ENST00000416146 368 ntBASIC3.73□□□□□ -1.81
HMGA1P17096 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGA1P17096 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HMGA1P17096 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGA1P17096 RPS4XP10-201ENST00000465034 731 ntBASIC3.73□□□□□ -1.81
HMGA1P17096 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HMGA1P17096 SETP14-201ENST00000497538 873 ntBASIC3.73□□□□□ -1.81
HMGA1P17096 AL358832.1-201ENST00000497800 389 ntBASIC3.73□□□□□ -1.81
HMGA1P17096 AC026784.1-201ENST00000507986 352 ntBASIC3.73□□□□□ -1.81
HMGA1P17096 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.73□□□□□ -1.81
HMGA1P17096 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGA1P17096 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGA1P17096 AC107016.1-201ENST00000550463 337 ntBASIC3.73□□□□□ -1.81
HMGA1P17096 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.73□□□□□ -1.81
HMGA1P17096 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGA1P17096 EIF1P6-201ENST00000600054 334 ntBASIC3.73□□□□□ -1.81
HMGA1P17096 MIR7851-201ENST00000610611 160 ntBASIC3.73□□□□□ -1.81
HMGA1P17096 AC241377.1-201ENST00000619797 406 ntBASIC3.73□□□□□ -1.81
HMGA1P17096 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HMGA1P17096 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.73□□□□□ -1.81
HMGA1P17096 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HMGA1P17096 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HMGA1P17096 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HMGA1P17096 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HMGA1P17096 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
HMGA1P17096 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HMGA1P17096 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGA1P17096 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HMGA1P17096 RNU4-35P-201ENST00000362588 141 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 RNU1-33P-201ENST00000364249 162 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 RNA5SP267-201ENST00000364893 126 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 SNORD17-201ENST00000390930 237 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 AC004552.1-201ENST00000419089 348 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 BX842559.1-201ENST00000419615 532 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HMGA1P17096 RPL26P28-201ENST00000451325 435 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 RPS26P3-201ENST00000470205 348 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 AC025518.1-201ENST00000479856 347 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 AC090543.2-201ENST00000483963 348 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 AC004057.1-201ENST00000485827 348 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGA1P17096 AGGF1P3-201ENST00000493675 1213 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.72□□□□□ -1.81
HMGA1P17096 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.72□□□□□ -1.81
HMGA1P17096 RNU6-579P-201ENST00000516879 102 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.72□□□□□ -1.81
HMGA1P17096 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.72□□□□□ -1.81
HMGA1P17096 AL360157.1-201ENST00000565962 87 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 OOSP1P2-201ENST00000579644 351 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.72□□□□□ -1.81
HMGA1P17096 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.72□□□□□ -1.81
HMGA1P17096 AL355365.1-201ENST00000616480 294 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 U4.6-201ENST00000621618 127 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 AC007342.8-201ENST00000623278 678 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.72□□□□□ -1.81
HMGA1P17096 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HMGA1P17096 KPNA2P2-201ENST00000419546 1489 ntBASIC3.72□□□□□ -1.81
HMGA1P17096 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HMGA1P17096 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.72□□□□□ -1.81
HMGA1P17096 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGA1P17096 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.71□□□□□ -1.81
HMGA1P17096 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
HMGA1P17096 MAPK10-373ENST00000641983 6772 ntBASIC3.71□□□□□ -1.82
HMGA1P17096 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HMGA1P17096 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HMGA1P17096 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMGA1P17096 RPL21P109-201ENST00000422213 475 ntBASIC3.71□□□□□ -1.82
HMGA1P17096 USP12PY-201ENST00000427677 1064 ntBASIC3.71□□□□□ -1.82
HMGA1P17096 AL035458.1-201ENST00000433096 585 ntBASIC3.71□□□□□ -1.82
HMGA1P17096 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.71□□□□□ -1.82
HMGA1P17096 AP000563.1-201ENST00000490865 758 ntBASIC3.71□□□□□ -1.82
HMGA1P17096 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGA1P17096 AC010342.1-201ENST00000514047 877 ntBASIC3.71□□□□□ -1.82
HMGA1P17096 AC092747.2-201ENST00000545069 983 ntBASIC3.71□□□□□ -1.82
HMGA1P17096 MIR5186-201ENST00000577504 120 ntBASIC3.71□□□□□ -1.82
HMGA1P17096 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGA1P17096 AC017100.2-201ENST00000584628 355 ntBASIC3.71□□□□□ -1.82
HMGA1P17096 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.71□□□□□ -1.82
HMGA1P17096 AL031985.2-201ENST00000600955 480 ntBASIC3.71□□□□□ -1.82
HMGA1P17096 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.71□□□□□ -1.82
HMGA1P17096 AC073869.7-201ENST00000640874 297 ntBASIC3.71□□□□□ -1.82
HMGA1P17096 AL732372.2-225ENST00000642124 456 ntBASIC3.71□□□□□ -1.82
HMGA1P17096 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMGA1P17096 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMGA1P17096 CDY3P-201ENST00000454543 1618 ntBASIC3.7□□□□□ -1.82
HMGA1P17096 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.7□□□□□ -1.82
HMGA1P17096 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HMGA1P17096 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HMGA1P17096 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HMGA1P17096 HSPE1P8-201ENST00000406997 288 ntBASIC3.7□□□□□ -1.82
HMGA1P17096 RNA5SP39-201ENST00000411245 120 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms