Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RPL21P109-201ENST00000422213 475 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 OR5AW1P-201ENST00000426334 1006 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.32□□□□□ -1.88
FREM3P0C091 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.32□□□□□ -1.88
FREM3P0C091 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
FREM3P0C091 PRSS3P4-201ENST00000453323 162 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.32□□□□□ -1.88
FREM3P0C091 AP000563.1-201ENST00000490865 758 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 SNORA70.18-201ENST00000516696 98 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.32□□□□□ -1.88
FREM3P0C091 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.32□□□□□ -1.88
FREM3P0C091 AC008126.1-201ENST00000549019 480 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 AC090877.1-201ENST00000561418 344 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 SNORA51-201ENST00000606420 132 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 AC005344.1-201ENST00000613391 459 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
FREM3P0C091 AC007823.1-201ENST00000569932 1566 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
FREM3P0C091 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
FREM3P0C091 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
FREM3P0C091 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
FREM3P0C091 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
FREM3P0C091 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
FREM3P0C091 FRG1CP-201ENST00000358464 769 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
FREM3P0C091 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.32□□□□□ -1.88
FREM3P0C091 AC002075.2-201ENST00000425207 252 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 AL035458.1-201ENST00000433096 585 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 AC127537.2-201ENST00000439258 465 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 AC099560.2-201ENST00000457554 255 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 AC135999.1-201ENST00000478962 479 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 TRBV12-2-201ENST00000489763 344 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 AC074140.1-201ENST00000621617 208 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 AC007342.8-201ENST00000623278 678 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 AC091905.1-201ENST00000624400 311 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 AL392088.2-201ENST00000637607 285 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 OR5AC4P-202ENST00000642086 985 ntBASIC3.32□□□□□ -1.88
FREM3P0C091 AC233968.1-201ENST00000611212 1300 ntBASIC3.31□□□□□ -1.88
FREM3P0C091 RNU4-35P-201ENST00000362588 141 ntBASIC3.31□□□□□ -1.88
FREM3P0C091 MIR199A2-201ENST00000385289 110 ntBASIC3.31□□□□□ -1.88
FREM3P0C091 ATP5F1P4-201ENST00000397288 746 ntBASIC3.31□□□□□ -1.88
FREM3P0C091 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.31□□□□□ -1.88
FREM3P0C091 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.31□□□□□ -1.88
FREM3P0C091 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.31□□□□□ -1.88
FREM3P0C091 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.31□□□□□ -1.88
FREM3P0C091 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FREM3P0C091 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.31□□□□□ -1.88
FREM3P0C091 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FREM3P0C091 AC093909.5-201ENST00000621839 1799 ntBASIC3.31□□□□□ -1.88
FREM3P0C091 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.31□□□□□ -1.88
FREM3P0C091 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FREM3P0C091 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FREM3P0C091 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
FREM3P0C091 RNA5SP197-201ENST00000363357 119 ntBASIC3.31□□□□□ -1.88
FREM3P0C091 RPL21P23-201ENST00000446654 460 ntBASIC3.31□□□□□ -1.88
FREM3P0C091 Z75741.1-201ENST00000446793 314 ntBASIC3.31□□□□□ -1.88
FREM3P0C091 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.31□□□□□ -1.88
FREM3P0C091 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.31□□□□□ -1.88
FREM3P0C091 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.31□□□□□ -1.88
FREM3P0C091 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.31□□□□□ -1.88
FREM3P0C091 AC020914.4-201ENST00000597690 277 ntBASIC3.31□□□□□ -1.88
FREM3P0C091 U3.45-201ENST00000607547 219 ntBASIC3.31□□□□□ -1.88
FREM3P0C091 AC026368.1-201ENST00000614934 690 ntBASIC3.31□□□□□ -1.88
FREM3P0C091 AL391261.4-201ENST00000616012 481 ntBASIC3.31□□□□□ -1.88
FREM3P0C091 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FREM3P0C091 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.3□□□□□ -1.88
FREM3P0C091 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
FREM3P0C091 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.3□□□□□ -1.88
FREM3P0C091 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FREM3P0C091 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FREM3P0C091 RNU1-89P-201ENST00000384592 164 ntBASIC3.3□□□□□ -1.88
FREM3P0C091 RN7SKP53-201ENST00000411337 315 ntBASIC3.3□□□□□ -1.88
FREM3P0C091 SETP10-201ENST00000424368 814 ntBASIC3.3□□□□□ -1.88
FREM3P0C091 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.3□□□□□ -1.88
FREM3P0C091 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.3□□□□□ -1.88
FREM3P0C091 AC093663.1-201ENST00000497190 394 ntBASIC3.3□□□□□ -1.88
FREM3P0C091 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.3□□□□□ -1.88
FREM3P0C091 HMGB3P13-201ENST00000511263 607 ntBASIC3.3□□□□□ -1.88
FREM3P0C091 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.3□□□□□ -1.88
FREM3P0C091 RFPL4AP5-201ENST00000514977 504 ntBASIC3.3□□□□□ -1.88
FREM3P0C091 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.3□□□□□ -1.88
FREM3P0C091 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.3□□□□□ -1.88
FREM3P0C091 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.3□□□□□ -1.88
FREM3P0C091 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.3□□□□□ -1.88
FREM3P0C091 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.3□□□□□ -1.88
FREM3P0C091 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.3□□□□□ -1.88
FREM3P0C091 AC006946.3-201ENST00000609791 756 ntBASIC3.3□□□□□ -1.88
FREM3P0C091 AC096577.2-201ENST00000611455 153 ntBASIC3.3□□□□□ -1.88
FREM3P0C091 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.3□□□□□ -1.88
FREM3P0C091 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.3□□□□□ -1.88
FREM3P0C091 OR6C71P-202ENST00000641886 1107 ntBASIC3.3□□□□□ -1.88
FREM3P0C091 AL606537.1-201ENST00000607258 2011 ntBASIC3.3□□□□□ -1.88
FREM3P0C091 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
FREM3P0C091 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.3□□□□□ -1.88
FREM3P0C091 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
FREM3P0C091 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
FREM3P0C091 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FREM3P0C091 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
FREM3P0C091 RNU6-249P-201ENST00000363016 102 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms