Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
HOXC4P09017 ZNF602P-201ENST00000405929 924 ntBASIC3.91□□□□□ -1.78
HOXC4P09017 SNORA3.3-201ENST00000408712 125 ntBASIC3.91□□□□□ -1.78
HOXC4P09017 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXC4P09017 RWDD4P2-201ENST00000426392 563 ntBASIC3.91□□□□□ -1.78
HOXC4P09017 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.91□□□□□ -1.78
HOXC4P09017 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXC4P09017 ARL5AP3-201ENST00000439327 386 ntBASIC3.91□□□□□ -1.78
HOXC4P09017 ELOCP10-201ENST00000440624 327 ntBASIC3.91□□□□□ -1.78
HOXC4P09017 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXC4P09017 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXC4P09017 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXC4P09017 RPL21P11-201ENST00000461458 483 ntBASIC3.91□□□□□ -1.78
HOXC4P09017 RPS4XP15-201ENST00000489210 795 ntBASIC3.91□□□□□ -1.78
HOXC4P09017 AC020593.1-201ENST00000507399 299 ntBASIC3.91□□□□□ -1.78
HOXC4P09017 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXC4P09017 IGKV2-38-201ENST00000517443 247 ntBASIC3.91□□□□□ -1.78
HOXC4P09017 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXC4P09017 AC068714.1-201ENST00000559623 800 ntBASIC3.91□□□□□ -1.78
HOXC4P09017 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.91□□□□□ -1.78
HOXC4P09017 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXC4P09017 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXC4P09017 MTCO2P22-201ENST00000603246 681 ntBASIC3.91□□□□□ -1.78
HOXC4P09017 ELOCP34-201ENST00000604436 327 ntBASIC3.91□□□□□ -1.78
HOXC4P09017 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXC4P09017 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXC4P09017 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXC4P09017 AC095050.2-201ENST00000510748 1458 ntBASIC3.91□□□□□ -1.78
HOXC4P09017 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXC4P09017 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXC4P09017 AC097504.1-201ENST00000515103 2415 ntBASIC3.91□□□□□ -1.78
HOXC4P09017 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.91□□□□□ -1.78
HOXC4P09017 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HOXC4P09017 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
HOXC4P09017 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HOXC4P09017 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
HOXC4P09017 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HOXC4P09017 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXC4P09017 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HOXC4P09017 AL589826.1-201ENST00000340697 249 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 RNA5SP97-201ENST00000365006 84 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 RPL7AP73-201ENST00000413490 353 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC4P09017 AC093698.1-201ENST00000423843 571 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC4P09017 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC4P09017 MTCO1P45-201ENST00000431457 267 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AC007389.2-201ENST00000434630 306 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AC092013.1-201ENST00000438795 332 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 RPS29P7-201ENST00000439662 171 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC4P09017 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC4P09017 VN1R48P-201ENST00000448149 1036 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC4P09017 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC4P09017 MTND2P3-201ENST00000452458 470 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AL133477.1-201ENST00000457472 514 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 RPS20P21-201ENST00000466859 343 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC4P09017 AC007537.2-201ENST00000472093 511 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AL139099.1-201ENST00000497398 403 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXC4P09017 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HOXC4P09017 MTND4LP31-201ENST00000514859 294 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 RN7SKP141-201ENST00000516167 338 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC4P09017 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC4P09017 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC4P09017 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC4P09017 MED28P5-201ENST00000528254 438 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC4P09017 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC4P09017 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC4P09017 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC4P09017 AC005014.3-201ENST00000605985 190 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AC116447.1-201ENST00000613153 453 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AC003001.2-201ENST00000616294 831 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AL161637.1-201ENST00000622380 412 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AC067852.7-201ENST00000623270 535 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AC124312.6-202ENST00000623624 418 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AC020923.1-201ENST00000624021 917 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AP000720.1-201ENST00000625091 483 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXC4P09017 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXC4P09017 AC006042.3-201ENST00000454684 1469 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 AP002001.2-201ENST00000529025 1469 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXC4P09017 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HOXC4P09017 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HOXC4P09017 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HOXC4P09017 Z73965.1-201ENST00000623412 2297 ntBASIC3.9□□□□□ -1.79
HOXC4P09017 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
HOXC4P09017 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HOXC4P09017 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC4P09017 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC4P09017 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC4P09017 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms