Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RN7SKP287-201ENST00000516546 266 ntBASIC4.23□□□□□ -1.73
CLPTM1O96005 RNU6-1004P-201ENST00000516584 111 ntBASIC4.23□□□□□ -1.73
CLPTM1O96005 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.23□□□□□ -1.73
CLPTM1O96005 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.23□□□□□ -1.73
CLPTM1O96005 LRRC34P1-201ENST00000542742 915 ntBASIC4.23□□□□□ -1.73
CLPTM1O96005 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.23□□□□□ -1.73
CLPTM1O96005 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.23□□□□□ -1.73
CLPTM1O96005 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.23□□□□□ -1.73
CLPTM1O96005 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.23□□□□□ -1.73
CLPTM1O96005 AC012603.1-201ENST00000606424 528 ntBASIC4.23□□□□□ -1.73
CLPTM1O96005 AP001521.2-201ENST00000608772 546 ntBASIC4.23□□□□□ -1.73
CLPTM1O96005 AC073569.3-201ENST00000619055 682 ntBASIC4.23□□□□□ -1.73
CLPTM1O96005 AC024023.1-201ENST00000624530 922 ntBASIC4.23□□□□□ -1.73
CLPTM1O96005 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLPTM1O96005 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.23□□□□□ -1.73
CLPTM1O96005 AC099654.2-201ENST00000433031 1980 ntBASIC4.23□□□□□ -1.73
CLPTM1O96005 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLPTM1O96005 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
CLPTM1O96005 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLPTM1O96005 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CLPTM1O96005 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CLPTM1O96005 SEPT7P7-201ENST00000420492 1301 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.22□□□□□ -1.73
CLPTM1O96005 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.22□□□□□ -1.73
CLPTM1O96005 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLPTM1O96005 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.22□□□□□ -1.73
CLPTM1O96005 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.22□□□□□ -1.73
CLPTM1O96005 AC103591.2-201ENST00000265259 766 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CLPTM1O96005 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CLPTM1O96005 RN7SKP115-201ENST00000363177 317 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 RNA5SP27-201ENST00000363839 119 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 SNORA62.2-201ENST00000364672 152 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CLPTM1O96005 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CLPTM1O96005 AL590762.2-201ENST00000395798 571 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 AF228730.1-201ENST00000397972 663 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLPTM1O96005 HMGB3P31-201ENST00000413333 595 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.22□□□□□ -1.73
CLPTM1O96005 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.22□□□□□ -1.73
CLPTM1O96005 AC092648.1-201ENST00000425870 423 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 MTCO1P52-201ENST00000433928 531 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.22□□□□□ -1.73
CLPTM1O96005 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.22□□□□□ -1.73
CLPTM1O96005 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.22□□□□□ -1.73
CLPTM1O96005 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLPTM1O96005 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLPTM1O96005 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLPTM1O96005 RPL23AP56-201ENST00000460778 453 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 AP000926.1-201ENST00000479573 241 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 MTCO3P35-201ENST00000485582 781 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 AC105233.1-201ENST00000498840 781 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.22□□□□□ -1.73
CLPTM1O96005 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.22□□□□□ -1.73
CLPTM1O96005 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.22□□□□□ -1.73
CLPTM1O96005 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 OR5AK3P-201ENST00000527486 1297 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 BRD9P1-201ENST00000529855 560 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.22□□□□□ -1.73
CLPTM1O96005 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.22□□□□□ -1.73
CLPTM1O96005 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.22□□□□□ -1.73
CLPTM1O96005 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.22□□□□□ -1.73
CLPTM1O96005 MTND3P12-201ENST00000559068 328 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.22□□□□□ -1.73
CLPTM1O96005 MIR4512-201ENST00000583257 77 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.22□□□□□ -1.73
CLPTM1O96005 VN1R84P-201ENST00000593697 235 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 AC234772.3-201ENST00000602277 528 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 AP002906.1-201ENST00000603405 233 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 AL031320.1-201ENST00000604177 357 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 AC093424.1-201ENST00000604999 338 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 MIR432-201ENST00000606207 94 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 Mico1.1-201ENST00000611698 204 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.22□□□□□ -1.73
CLPTM1O96005 AC079395.3-201ENST00000615161 484 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.22□□□□□ -1.73
CLPTM1O96005 AC006386.1-201ENST00000619436 415 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CLPTM1O96005 AC104985.3-201ENST00000623479 597 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.22□□□□□ -1.73
CLPTM1O96005 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.22□□□□□ -1.73
CLPTM1O96005 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLPTM1O96005 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLPTM1O96005 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CLPTM1O96005 SAMMSON-226ENST00000642089 1582 ntBASIC4.22□□□□□ -1.73
CLPTM1O96005 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CLPTM1O96005 AL139811.1-201ENST00000424779 2299 ntBASIC4.21□□□□□ -1.73
CLPTM1O96005 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
CLPTM1O96005 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CLPTM1O96005 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
CLPTM1O96005 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
CLPTM1O96005 AC090229.1-201ENST00000590983 1609 ntBASIC4.21□□□□□ -1.73
CLPTM1O96005 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLPTM1O96005 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CLPTM1O96005 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CLPTM1O96005 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CLPTM1O96005 XIAPP3-201ENST00000312918 795 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms