Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.21□□□□□ -1.74
CTDNEP1O95476 AC007823.1-201ENST00000569932 1566 ntBASIC4.21□□□□□ -1.74
CTDNEP1O95476 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
CTDNEP1O95476 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTDNEP1O95476 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CTDNEP1O95476 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CTDNEP1O95476 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.2□□□□□ -1.74
CTDNEP1O95476 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.2□□□□□ -1.74
CTDNEP1O95476 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTDNEP1O95476 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.2□□□□□ -1.74
CTDNEP1O95476 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTDNEP1O95476 OR10J6P-201ENST00000289731 930 ntBASIC4.2□□□□□ -1.74
CTDNEP1O95476 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CTDNEP1O95476 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.2□□□□□ -1.74
CTDNEP1O95476 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CTDNEP1O95476 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.2□□□□□ -1.74
CTDNEP1O95476 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.2□□□□□ -1.74
CTDNEP1O95476 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.2□□□□□ -1.74
CTDNEP1O95476 VN1R96P-201ENST00000446052 858 ntBASIC4.2□□□□□ -1.74
CTDNEP1O95476 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.2□□□□□ -1.74
CTDNEP1O95476 FCF1P3-201ENST00000496394 590 ntBASIC4.2□□□□□ -1.74
CTDNEP1O95476 SNORA70.18-201ENST00000516696 98 ntBASIC4.2□□□□□ -1.74
CTDNEP1O95476 snoU109.6-201ENST00000516831 118 ntBASIC4.2□□□□□ -1.74
CTDNEP1O95476 MTCYBP19-201ENST00000517463 1124 ntBASIC4.2□□□□□ -1.74
CTDNEP1O95476 HMGB3P26-201ENST00000560051 582 ntBASIC4.2□□□□□ -1.74
CTDNEP1O95476 AC027281.1-201ENST00000574178 758 ntBASIC4.2□□□□□ -1.74
CTDNEP1O95476 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.2□□□□□ -1.74
CTDNEP1O95476 AC006077.1-201ENST00000604746 343 ntBASIC4.2□□□□□ -1.74
CTDNEP1O95476 AC090912.3-201ENST00000609775 533 ntBASIC4.2□□□□□ -1.74
CTDNEP1O95476 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CTDNEP1O95476 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.2□□□□□ -1.74
CTDNEP1O95476 AC018529.3-201ENST00000624212 2254 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CTDNEP1O95476 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTDNEP1O95476 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTDNEP1O95476 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTDNEP1O95476 RNA5SP124-201ENST00000362739 110 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 RN7SKP227-201ENST00000364445 330 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTDNEP1O95476 MIR1193-201ENST00000408109 78 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 MTND4P22-201ENST00000413116 1169 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.19□□□□□ -1.74
CTDNEP1O95476 VN1R31P-201ENST00000417498 730 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.19□□□□□ -1.74
CTDNEP1O95476 AL445584.1-201ENST00000431451 330 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.19□□□□□ -1.74
CTDNEP1O95476 AC022431.1-201ENST00000450941 438 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 AL121877.1-201ENST00000453704 622 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 AC007967.1-201ENST00000455422 1159 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 AL133244.1-201ENST00000456007 258 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 RPL23AP73-201ENST00000492507 471 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 AC146944.2-203ENST00000502493 354 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 AC139495.1-202ENST00000513164 354 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 RNU6-579P-201ENST00000516879 102 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.19□□□□□ -1.74
CTDNEP1O95476 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.19□□□□□ -1.74
CTDNEP1O95476 GTF2IP22-201ENST00000554443 182 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.19□□□□□ -1.74
CTDNEP1O95476 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.19□□□□□ -1.74
CTDNEP1O95476 AL121772.2-201ENST00000614331 297 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 AC067931.1-201ENST00000624190 671 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 AL356121.2-201ENST00000624715 780 ntBASIC4.19□□□□□ -1.74
CTDNEP1O95476 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.19□□□□□ -1.74
CTDNEP1O95476 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CTDNEP1O95476 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTDNEP1O95476 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CTDNEP1O95476 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTDNEP1O95476 AC104297.1-201ENST00000393779 870 ntBASIC4.18□□□□□ -1.74
CTDNEP1O95476 RPL30P2-201ENST00000414021 291 ntBASIC4.18□□□□□ -1.74
CTDNEP1O95476 IPMKP1-201ENST00000425988 855 ntBASIC4.18□□□□□ -1.74
CTDNEP1O95476 RPS26P40-201ENST00000435209 294 ntBASIC4.18□□□□□ -1.74
CTDNEP1O95476 NOTCH2P1-201ENST00000443481 624 ntBASIC4.18□□□□□ -1.74
CTDNEP1O95476 AP002371.1-201ENST00000463604 433 ntBASIC4.18□□□□□ -1.74
CTDNEP1O95476 HMGB3P14-201ENST00000494195 599 ntBASIC4.18□□□□□ -1.74
CTDNEP1O95476 MTCO3P42-201ENST00000509488 518 ntBASIC4.18□□□□□ -1.74
CTDNEP1O95476 MTCO3P39-201ENST00000514812 518 ntBASIC4.18□□□□□ -1.74
CTDNEP1O95476 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.18□□□□□ -1.74
CTDNEP1O95476 AC090281.1-201ENST00000523019 276 ntBASIC4.18□□□□□ -1.74
CTDNEP1O95476 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTDNEP1O95476 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.18□□□□□ -1.74
CTDNEP1O95476 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.18□□□□□ -1.74
CTDNEP1O95476 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CTDNEP1O95476 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.18□□□□□ -1.74
CTDNEP1O95476 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CTDNEP1O95476 AL451086.1-201ENST00000605596 223 ntBASIC4.18□□□□□ -1.74
CTDNEP1O95476 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.18□□□□□ -1.74
CTDNEP1O95476 AL357559.1-201ENST00000622228 274 ntBASIC4.18□□□□□ -1.74
CTDNEP1O95476 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.18□□□□□ -1.74
CTDNEP1O95476 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CTDNEP1O95476 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTDNEP1O95476 AC233968.1-201ENST00000611212 1300 ntBASIC4.18□□□□□ -1.74
CTDNEP1O95476 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CTDNEP1O95476 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTDNEP1O95476 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CTDNEP1O95476 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CTDNEP1O95476 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTDNEP1O95476 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CTDNEP1O95476 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.17□□□□□ -1.74
CTDNEP1O95476 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms